Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC144BQ3MJ40 AP002512.4-202ENST00000641599 4530 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AL445437.1-201ENST00000623157 3087 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AL159987.1-201ENST00000347911 293 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 SNORA74A-201ENST00000364089 198 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 MIR937-201ENST00000401271 86 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 RNU2-50P-201ENST00000410494 143 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 RN7SKP279-201ENST00000411383 298 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 MFSD13B-201ENST00000420133 1290 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 MRPS36P1-201ENST00000421291 307 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC009965.2-201ENST00000425328 970 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC092393.1-201ENST00000439625 742 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 ELOCP10-201ENST00000440624 327 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AL603882.1-201ENST00000463059 681 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 PFN1P6-201ENST00000476786 399 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 OR5M14P-201ENST00000506803 618 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC048346.1-201ENST00000510247 144 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 RNA5SP135-201ENST00000517019 125 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 HIGD1AP6-201ENST00000521833 279 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AP000619.3-201ENST00000535634 1127 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 OSBPL9P5-201ENST00000542581 171 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC044860.2-201ENST00000561005 179 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC063977.5-201ENST00000601044 974 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 ELOCP34-201ENST00000604436 327 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AP003392.5-201ENST00000607857 415 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 BNIP3P41-202ENST00000616656 861 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 MIR6730-201ENST00000622213 67 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC004158.1-201ENST00000564508 4319 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AL590763.1-201ENST00000398297 1545 ntBASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC144BQ3MJ40 AC009229.4-201ENST00000623854 1947 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AL158152.1-201ENST00000602652 1435 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AC053481.2-202ENST00000582394 1500 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AP000756.2-201ENST00000624168 2567 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AC017079.1-201ENST00000333650 415 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 RNU1-146P-201ENST00000364015 165 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AL356131.1-201ENST00000405826 414 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 MIR1286-201ENST00000408112 78 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AL450992.3-201ENST00000413192 568 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AC006960.1-201ENST00000419980 153 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 OFD1P2Y-201ENST00000421895 1149 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 RPS27AP6-201ENST00000427962 448 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 NPM1P18-201ENST00000434232 732 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 RPS26P40-201ENST00000435209 294 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 FGF7P5-201ENST00000441829 291 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AL450996.1-201ENST00000445574 1202 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 AC104306.1-201ENST00000449702 371 ntBASIC6.52□□□□□ -1.37
CCDC144BQ3MJ40 ATG12P2-201ENST00000456830 416 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms