Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 MIR141-201ENST00000384975 95 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 MIR3065-201ENST00000390137 79 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 RN7SKP167-201ENST00000411047 285 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AC016712.1-201ENST00000431088 378 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 RNA5SP103-201ENST00000459503 118 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 NIP7P2-201ENST00000485801 544 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AC015795.1-201ENST00000513669 327 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AC010476.1-201ENST00000519111 851 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AC009643.1-201ENST00000532030 391 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AL121839.1-201ENST00000556233 1185 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AC079587.1-201ENST00000603846 277 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AL160290.3-201ENST00000604869 165 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AL035461.2-201ENST00000619201 524 ntBASIC5.7□□□□□ -1.5
TWISTNBQ3B726 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TWISTNBQ3B726 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AC016397.1-201ENST00000412463 242 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 REREP1Y-201ENST00000422655 198 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 RPL23AP25-201ENST00000430973 463 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 MAPRE1P3-201ENST00000435438 796 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 REREP2Y-201ENST00000439103 200 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 ARAFP2-201ENST00000440565 559 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AC114495.1-201ENST00000441274 436 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 FHP1-201ENST00000442741 703 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 EIF2S2P2-201ENST00000447161 982 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 DDX39BP2-208ENST00000453923 258 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AC011276.1-201ENST00000469688 323 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 RN7SL481P-201ENST00000477764 299 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AP001804.2-201ENST00000533932 910 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 AC090017.1-201ENST00000548612 1779 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TWISTNBQ3B726 MAPK10-286ENST00000641208 8747 ntBASIC5.69□□□□□ -1.5
TWISTNBQ3B726 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 EOGT-210ENST00000615922 1931 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 AP001642.1-201ENST00000624727 2117 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 MIR331-201ENST00000362302 94 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 RNA5SP307-201ENST00000362863 116 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 AL672167.2-201ENST00000377164 879 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 RNU2-22P-201ENST00000411266 212 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 RPS20P14-201ENST00000412545 360 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 DPPA2P2-201ENST00000418220 897 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 RPEP2-201ENST00000432149 701 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 RAD1P2-201ENST00000446414 663 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 RN7SL98P-201ENST00000462271 300 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 RN7SL810P-201ENST00000493031 276 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 ASNSP4-201ENST00000511103 447 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 HIGD1AP5-201ENST00000529959 259 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 CYCSP28-201ENST00000534284 321 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 MTATP6P25-201ENST00000574491 261 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 AF230666.2-201ENST00000602328 725 ntBASIC5.68□□□□□ -1.5
TWISTNBQ3B726 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.68□□□□□ -1.5
TWISTNBQ3B726 AL023583.1-201ENST00000607518 1143 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms