Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 SNORA71.2-201ENST00000364941 134 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 NCSTNP1-201ENST00000406229 144 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 AL356387.2-201ENST00000422272 243 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 EIF4HP2-201ENST00000424380 563 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 AL136231.1-201ENST00000429407 730 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 AL162591.2-201ENST00000449634 317 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 RHEBP2-201ENST00000450289 600 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 RPL7AP28-201ENST00000464513 571 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 AP000926.3-201ENST00000497201 299 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 MIR4660-201ENST00000583549 74 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 AC010615.3-201ENST00000597319 394 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 SNORA35B-201ENST00000607417 129 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 DDX18P5-201ENST00000534547 1306 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 AC112198.2-201ENST00000426589 6996 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 OR10AB1P-202ENST00000641219 1686 ntBASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 ZFRP1-201ENST00000457579 2970 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 MIR1193-201ENST00000408109 78 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 RN7SKP247-201ENST00000411094 308 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 MTCO1P51-201ENST00000427672 1060 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 AC004938.1-201ENST00000438468 308 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 CYCSP24-201ENST00000445119 316 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 CYCSP34-201ENST00000458172 304 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 RNU4-18P-201ENST00000516751 149 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 TRAV11-201ENST00000539512 339 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 AC067959.1-201ENST00000604334 379 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 MAPK10-263ENST00000641052 4307 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 AL445487.1-201ENST00000415694 1580 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 THAP12P5-201ENST00000405864 2275 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 AC092376.2-201ENST00000622621 4116 ntBASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM1Q2M3G4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 HSPA8P17-201ENST00000427029 1382 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 AC008033.1-201ENST00000216407 1162 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 OR6C69P-201ENST00000394268 893 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 AC104333.2-201ENST00000422630 192 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 NDUFA5P1-201ENST00000433858 341 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 RPS3AP54-201ENST00000435535 734 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 AC099063.2-201ENST00000446360 662 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 RPL10P17-201ENST00000453852 316 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 AC025164.1-201ENST00000496249 478 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 snoU109.6-201ENST00000516831 118 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 TRAV8-5-201ENST00000537369 341 ntBASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.35□□□□□ -1.55
SHROOM1Q2M3G4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms