Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC091046.3-201ENST00000631455 1574 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AC104260.2-201ENST00000623551 3497 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 RPS29P17-201ENST00000430795 166 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AC239367.2-201ENST00000447309 705 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AC012671.1-201ENST00000451912 203 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AC041039.1-201ENST00000485656 536 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AL109766.1-201ENST00000555080 552 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AC021483.2-201ENST00000567415 758 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AC008759.1-201ENST00000589783 983 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 OR2L1P-202ENST00000641567 1023 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 MFSD8-242ENST00000641690 4199 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.39□□□□□ -1.55
RFX7Q2KHR2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.39□□□□□ -1.55
RFX7Q2KHR2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 AC126323.6-202ENST00000568092 3511 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 RNA5SP28-201ENST00000363841 119 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 RN7SKP227-201ENST00000364445 330 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 RNA5SP22-201ENST00000365393 109 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 MIR195-201ENST00000385194 87 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 RNA5SP372-201ENST00000390836 115 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 AL078604.1-201ENST00000404609 466 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 RN7SKP97-201ENST00000410966 333 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 ACTR3P2-201ENST00000439585 1257 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 RN7SL303P-201ENST00000469773 251 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 EIF2AP4-201ENST00000424793 1781 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 AC090017.1-201ENST00000548612 1779 ntBASIC5.38□□□□□ -1.55
RFX7Q2KHR2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX7Q2KHR2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 OR5P1P-201ENST00000299512 925 ntBASIC5.37□□□□□ -1.55
RFX7Q2KHR2 RPL23AP25-201ENST00000430973 463 ntBASIC5.37□□□□□ -1.55
RFX7Q2KHR2 RPS4XP12-201ENST00000461747 709 ntBASIC5.37□□□□□ -1.55
RFX7Q2KHR2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 SLC25A36P1-201ENST00000590111 465 ntBASIC5.37□□□□□ -1.55
RFX7Q2KHR2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 AC067959.1-201ENST00000604334 379 ntBASIC5.37□□□□□ -1.55
RFX7Q2KHR2 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.37□□□□□ -1.55
RFX7Q2KHR2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 AC005005.4-201ENST00000623789 16698 ntBASIC5.36□□□□□ -1.55
RFX7Q2KHR2 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RFX7Q2KHR2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms