Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
USF2Q15853 KARSP3-201ENST00000571212 1504 ntBASIC3.94□□□□□ -1.78
USF2Q15853 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
USF2Q15853 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
USF2Q15853 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC3.94□□□□□ -1.78
USF2Q15853 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USF2Q15853 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
USF2Q15853 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USF2Q15853 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
USF2Q15853 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.93□□□□□ -1.78
USF2Q15853 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
USF2Q15853 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.93□□□□□ -1.78
USF2Q15853 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
USF2Q15853 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
USF2Q15853 RNU1-108P-201ENST00000362556 161 ntBASIC3.93□□□□□ -1.78
USF2Q15853 MIR600-201ENST00000385007 98 ntBASIC3.93□□□□□ -1.78
USF2Q15853 RNU6-244P-201ENST00000391028 104 ntBASIC3.93□□□□□ -1.78
USF2Q15853 NUDT19P3-201ENST00000404698 555 ntBASIC3.93□□□□□ -1.78
USF2Q15853 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.93□□□□□ -1.78
USF2Q15853 MIR1182-201ENST00000408363 97 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.93□□□□□ -1.78
USF2Q15853 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.93□□□□□ -1.78
USF2Q15853 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.93□□□□□ -1.78
USF2Q15853 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.93□□□□□ -1.78
USF2Q15853 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.93□□□□□ -1.78
USF2Q15853 RPL7L1P9-201ENST00000431298 745 ntBASIC3.93□□□□□ -1.78
USF2Q15853 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
USF2Q15853 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.93□□□□□ -1.78
USF2Q15853 CEACAMP1-201ENST00000434624 1035 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.93□□□□□ -1.78
USF2Q15853 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.93□□□□□ -1.78
USF2Q15853 AC104629.2-201ENST00000468627 598 ntBASIC3.93□□□□□ -1.78
USF2Q15853 SIAH1P1-201ENST00000479411 923 ntBASIC3.93□□□□□ -1.78
USF2Q15853 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
USF2Q15853 AC106872.2-201ENST00000494303 480 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AC146944.2-203ENST00000502493 354 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AC139495.1-202ENST00000513164 354 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.93□□□□□ -1.78
USF2Q15853 RNA5SP362-201ENST00000516048 118 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.93□□□□□ -1.78
USF2Q15853 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.93□□□□□ -1.78
USF2Q15853 AC008083.2-201ENST00000546707 476 ntBASIC3.93□□□□□ -1.78
USF2Q15853 OR4U1P-201ENST00000554958 912 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.93□□□□□ -1.78
USF2Q15853 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.93□□□□□ -1.78
USF2Q15853 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USF2Q15853 AC115989.2-201ENST00000578640 563 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.93□□□□□ -1.78
USF2Q15853 AC068790.5-201ENST00000602741 355 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AC103792.1-201ENST00000603591 919 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.93□□□□□ -1.78
USF2Q15853 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.93□□□□□ -1.78
USF2Q15853 AL589935.2-201ENST00000616471 1231 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AC090527.3-201ENST00000619041 548 ntBASIC3.93□□□□□ -1.78
USF2Q15853 AL669942.2-201ENST00000620352 697 ntBASIC3.93□□□□□ -1.78
USF2Q15853 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
USF2Q15853 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
USF2Q15853 DCAF13P3-201ENST00000561147 1334 ntBASIC3.93□□□□□ -1.78
USF2Q15853 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.92□□□□□ -1.78
USF2Q15853 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USF2Q15853 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.92□□□□□ -1.78
USF2Q15853 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USF2Q15853 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.92□□□□□ -1.78
USF2Q15853 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
USF2Q15853 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USF2Q15853 RN7SKP113-201ENST00000363891 295 ntBASIC3.92□□□□□ -1.78
USF2Q15853 SNORD96B-201ENST00000386148 79 ntBASIC3.92□□□□□ -1.78
USF2Q15853 OR3A2-201ENST00000408891 1076 ntBASIC3.92□□□□□ -1.78
USF2Q15853 RN7SKP229-201ENST00000410465 302 ntBASIC3.92□□□□□ -1.78
USF2Q15853 RN7SKP59-201ENST00000410520 314 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.92□□□□□ -1.78
USF2Q15853 CEACAMP8-201ENST00000413902 580 ntBASIC3.92□□□□□ -1.78
USF2Q15853 MTND4P11-201ENST00000417020 1058 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USF2Q15853 AC079355.1-201ENST00000421770 223 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AC108075.1-201ENST00000424692 529 ntBASIC3.92□□□□□ -1.78
USF2Q15853 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.92□□□□□ -1.78
USF2Q15853 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 AC004980.3-201ENST00000447046 365 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AL354714.3-201ENST00000447284 493 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AL356981.1-201ENST00000454879 684 ntBASIC3.92□□□□□ -1.78
USF2Q15853 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USF2Q15853 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.92□□□□□ -1.78
USF2Q15853 RN7SL443P-201ENST00000464331 290 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AC087385.1-201ENST00000475062 312 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AC074386.1-201ENST00000476560 767 ntBASIC3.92□□□□□ -1.78
USF2Q15853 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 AC020890.1-201ENST00000491837 504 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.92□□□□□ -1.78
USF2Q15853 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.92□□□□□ -1.78
USF2Q15853 RNA5SP309-201ENST00000516670 106 ntBASIC3.92□□□□□ -1.78
USF2Q15853 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USF2Q15853 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.92□□□□□ -1.78
USF2Q15853 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.92□□□□□ -1.78
USF2Q15853 AC134349.2-201ENST00000535136 910 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms