Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RNA5SP307-201ENST00000362863 116 ntBASIC4□□□□□ -1.77
FOXF1Q12946 RNA5-8SP7-201ENST00000363443 155 ntBASIC4□□□□□ -1.77
FOXF1Q12946 RNA5SP447-201ENST00000363749 119 ntBASIC4□□□□□ -1.77
FOXF1Q12946 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4□□□□□ -1.77
FOXF1Q12946 SNORA74C-2-201ENST00000411179 201 ntBASIC4□□□□□ -1.77
FOXF1Q12946 SEPT7P8-201ENST00000413308 775 ntBASIC4□□□□□ -1.77
FOXF1Q12946 AL356387.2-201ENST00000422272 243 ntBASIC4□□□□□ -1.77
FOXF1Q12946 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4□□□□□ -1.77
FOXF1Q12946 AC011998.1-201ENST00000433403 117 ntBASIC4□□□□□ -1.77
FOXF1Q12946 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4□□□□□ -1.77
FOXF1Q12946 ARL4AP3-201ENST00000441452 574 ntBASIC4□□□□□ -1.77
FOXF1Q12946 RPS27AP15-201ENST00000447672 466 ntBASIC4□□□□□ -1.77
FOXF1Q12946 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4□□□□□ -1.77
FOXF1Q12946 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4□□□□□ -1.77
FOXF1Q12946 DHFRP3-201ENST00000455595 559 ntBASIC4□□□□□ -1.77
FOXF1Q12946 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4□□□□□ -1.77
FOXF1Q12946 EIF4A2P4-201ENST00000458691 1196 ntBASIC4□□□□□ -1.77
FOXF1Q12946 AC053481.1-201ENST00000467217 306 ntBASIC4□□□□□ -1.77
FOXF1Q12946 RPL23AP65-201ENST00000475608 468 ntBASIC4□□□□□ -1.77
FOXF1Q12946 RN7SL817P-201ENST00000480777 288 ntBASIC4□□□□□ -1.77
FOXF1Q12946 RPL7AP10-201ENST00000481016 791 ntBASIC4□□□□□ -1.77
FOXF1Q12946 AC090013.1-201ENST00000485147 480 ntBASIC4□□□□□ -1.77
FOXF1Q12946 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4□□□□□ -1.77
FOXF1Q12946 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4□□□□□ -1.77
FOXF1Q12946 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4□□□□□ -1.77
FOXF1Q12946 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4□□□□□ -1.77
FOXF1Q12946 RPL21P7-201ENST00000557463 483 ntBASIC4□□□□□ -1.77
FOXF1Q12946 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4□□□□□ -1.77
FOXF1Q12946 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4□□□□□ -1.77
FOXF1Q12946 MIR5096-201ENST00000583713 70 ntBASIC4□□□□□ -1.77
FOXF1Q12946 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4□□□□□ -1.77
FOXF1Q12946 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4□□□□□ -1.77
FOXF1Q12946 AL353726.1-201ENST00000614041 1000 ntBASIC4□□□□□ -1.77
FOXF1Q12946 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4□□□□□ -1.77
FOXF1Q12946 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4□□□□□ -1.77
FOXF1Q12946 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4□□□□□ -1.77
FOXF1Q12946 MTCO1P22-201ENST00000604619 1360 ntBASIC4□□□□□ -1.77
FOXF1Q12946 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
FOXF1Q12946 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXF1Q12946 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXF1Q12946 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXF1Q12946 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXF1Q12946 AC010300.1-201ENST00000600671 5134 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXF1Q12946 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXF1Q12946 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXF1Q12946 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
FOXF1Q12946 RNU1-20P-201ENST00000363314 162 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 RNA5SP28-201ENST00000363841 119 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
FOXF1Q12946 RPL23AP59-201ENST00000399415 461 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 RN7SKP247-201ENST00000411094 308 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 CEACAMP8-201ENST00000413902 580 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 AC009237.10-201ENST00000414112 510 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 RPA2P2-201ENST00000419698 796 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 RPS27AP7-201ENST00000422792 455 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 DNAJC19P7-201ENST00000428811 344 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 RPL12P28-201ENST00000430852 489 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 RPEP2-201ENST00000432149 701 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 AC114495.1-201ENST00000441274 436 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXF1Q12946 AC005008.1-201ENST00000456151 612 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 AC090151.1-201ENST00000520784 730 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 OR8G5-201ENST00000524943 1041 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 GSTP1P1-201ENST00000548078 319 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 GLRXP2-201ENST00000555594 321 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXF1Q12946 AC107993.1-201ENST00000591343 684 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXF1Q12946 AC090948.1-201ENST00000607464 549 ntBASIC3.99□□□□□ -1.77
FOXF1Q12946 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXF1Q12946 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXF1Q12946 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXF1Q12946 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FOXF1Q12946 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXF1Q12946 AC017104.4-201ENST00000636283 1592 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXF1Q12946 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
FOXF1Q12946 AC139713.2-214ENST00000642059 1811 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXF1Q12946 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXF1Q12946 OR5P1P-201ENST00000299512 925 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
FOXF1Q12946 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
FOXF1Q12946 AL078604.1-201ENST00000404609 466 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 ELOCP19-201ENST00000411919 318 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 AL160275.2-201ENST00000412010 394 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.98□□□□□ -1.77
FOXF1Q12946 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXF1Q12946 AL139095.3-201ENST00000419672 1203 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 AC009480.2-201ENST00000422916 432 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 AC068287.1-201ENST00000430283 295 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FOXF1Q12946 AL589765.3-201ENST00000446084 462 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 PHBP16-201ENST00000446318 950 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 CYCSP42-201ENST00000450823 238 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 Z95152.1-201ENST00000453556 656 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 AC006463.2-201ENST00000473326 348 ntBASIC3.98□□□□□ -1.77
FOXF1Q12946 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms