Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN1BQ07699 AP000580.1-201ENST00000404439 358 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 BX664727.1-201ENST00000416024 466 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN1BQ07699 TMBIM7P-201ENST00000418074 855 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN1BQ07699 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN1BQ07699 RPL12P17-201ENST00000432393 498 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN1BQ07699 AC105402.2-201ENST00000438503 358 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN1BQ07699 ARL4AP3-201ENST00000441452 574 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AC064862.4-201ENST00000442180 334 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AC019185.1-201ENST00000442718 389 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN1BQ07699 RPL6P5-201ENST00000445678 828 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN1BQ07699 NOP56P2-201ENST00000447491 769 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 RN7SL51P-201ENST00000468230 285 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN1BQ07699 IGBP1P5-201ENST00000507524 1000 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AC121161.1-201ENST00000510606 652 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AC008494.2-201ENST00000514544 370 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 RNU6-467P-201ENST00000517027 110 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN1BQ07699 AC134698.5-201ENST00000519444 336 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN1BQ07699 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 AC022882.1-201ENST00000532142 501 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN1BQ07699 AP003717.3-201ENST00000544832 1180 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN1BQ07699 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN1BQ07699 MTND4LP25-201ENST00000570218 163 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 MIR4458-201ENST00000578872 75 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AC108359.1-201ENST00000616451 1211 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AC243756.2-201ENST00000618406 463 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AC007683.2-201ENST00000624681 714 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 AP003400.6-201ENST00000624698 740 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SCN1BQ07699 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SCN1BQ07699 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN1BQ07699 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN1BQ07699 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SCN1BQ07699 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN1BQ07699 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SCN1BQ07699 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN1BQ07699 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
SCN1BQ07699 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN1BQ07699 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN1BQ07699 MTCO1P4-201ENST00000520516 1409 ntBASIC4.55□□□□□ -1.68
SCN1BQ07699 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SCN1BQ07699 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN1BQ07699 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN1BQ07699 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN1BQ07699 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC074029.4-201ENST00000624796 1859 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN1BQ07699 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SCN1BQ07699 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN1BQ07699 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN1BQ07699 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN1BQ07699 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN1BQ07699 AL035079.1-201ENST00000405210 287 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 HNRNPDP2-201ENST00000406475 478 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC114814.2-201ENST00000419195 485 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 E2F6P2-201ENST00000420708 748 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC002504.1-201ENST00000438281 691 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 SUMO2P3-201ENST00000438311 288 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 AL138899.2-201ENST00000439139 499 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC092809.1-201ENST00000441469 474 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN1BQ07699 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN1BQ07699 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 DNAJC19P8-201ENST00000452887 259 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 RPL7P45-201ENST00000455851 743 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC007998.1-201ENST00000474156 672 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.54□□□□□ -1.68
SCN1BQ07699 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN1BQ07699 AC021146.3-201ENST00000511911 260 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 ENPP7P9-201ENST00000514456 627 ntBASIC4.54□□□□□ -1.68
SCN1BQ07699 RN7SKP70-201ENST00000516655 271 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms