Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.3□□□□□ -1.56
CCNA1P78396 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCNA1P78396 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCNA1P78396 AC233968.1-201ENST00000611212 1300 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNA1P78396 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNA1P78396 AC104623.2-202ENST00000623477 4002 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 RNA5SP388-201ENST00000362584 119 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 RPL23AP59-201ENST00000399415 461 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 AMZ2P2-201ENST00000406819 1057 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 AL358178.1-201ENST00000407698 397 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 AC007738.1-201ENST00000413892 348 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNA1P78396 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCNA1P78396 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNA1P78396 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNA1P78396 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCNA1P78396 AC239367.2-201ENST00000447309 705 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNA1P78396 RPL7P32-201ENST00000457119 744 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 MYL12BP2-201ENST00000503948 512 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNA1P78396 AC134698.5-201ENST00000519444 336 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 AC138832.1-201ENST00000522871 556 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.29□□□□□ -1.56
CCNA1P78396 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
CCNA1P78396 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNA1P78396 AL049830.4-201ENST00000555149 351 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 MIR1254-2-201ENST00000579553 63 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNA1P78396 SNORA35B-201ENST00000607417 129 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 FRG1EP-201ENST00000634469 770 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 AC009950.2-201ENST00000636548 183 ntBASIC5.29□□□□□ -1.56
CCNA1P78396 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCNA1P78396 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCNA1P78396 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.29□□□□□ -1.56
CCNA1P78396 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.29□□□□□ -1.56
CCNA1P78396 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNA1P78396 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNA1P78396 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.29□□□□□ -1.56
CCNA1P78396 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNA1P78396 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.28□□□□□ -1.56
CCNA1P78396 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CCNA1P78396 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNA1P78396 DDX18P5-201ENST00000534547 1306 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNA1P78396 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCNA1P78396 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNA1P78396 RNA5SP515-201ENST00000364570 118 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCNA1P78396 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNA1P78396 AP000580.1-201ENST00000404439 358 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 AL121878.1-201ENST00000418638 859 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 OR6C64P-201ENST00000419708 825 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNA1P78396 NFYAP1-201ENST00000431953 972 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 RPL35AP21-201ENST00000437667 333 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 ACTR3P2-201ENST00000439585 1257 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 NUTF2P3-201ENST00000448540 384 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNA1P78396 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNA1P78396 RNU4-18P-201ENST00000516751 149 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 AC010476.1-201ENST00000519111 851 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCNA1P78396 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNA1P78396 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.28□□□□□ -1.56
CCNA1P78396 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNA1P78396 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNA1P78396 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 ARF4P1-201ENST00000605447 541 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.28□□□□□ -1.56
CCNA1P78396 LINC01808-202ENST00000641680 1116 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.28□□□□□ -1.56
CCNA1P78396 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.28□□□□□ -1.56
CCNA1P78396 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCNA1P78396 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCNA1P78396 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCNA1P78396 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.27□□□□□ -1.57
CCNA1P78396 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNA1P78396 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCNA1P78396 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCNA1P78396 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNA1P78396 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNA1P78396 RPS26P8-201ENST00000393490 348 ntBASIC5.27□□□□□ -1.57
CCNA1P78396 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNA1P78396 KCTD10P1-201ENST00000434203 625 ntBASIC5.27□□□□□ -1.57
CCNA1P78396 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNA1P78396 RPL7AP28-201ENST00000464513 571 ntBASIC5.27□□□□□ -1.57
CCNA1P78396 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.27□□□□□ -1.57
CCNA1P78396 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.27□□□□□ -1.57
CCNA1P78396 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
CCNA1P78396 SNORA31.9-201ENST00000516429 84 ntBASIC5.27□□□□□ -1.57
CCNA1P78396 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNA1P78396 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCNA1P78396 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.27□□□□□ -1.57
CCNA1P78396 AC084824.1-201ENST00000550917 1005 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms