Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 HSPD1P12-201ENST00000429127 1069 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 DYNLL1P7-201ENST00000429273 258 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 BX276092.6-201ENST00000430476 250 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 AC009238.2-201ENST00000431026 355 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.05□□□□□ -1.44
RHBDL3P58872 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 MED28P3-201ENST00000444288 531 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 AC112498.1-201ENST00000444401 332 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AL354714.3-201ENST00000447284 493 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 BX276092.8-201ENST00000455722 250 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 RPS29P33-201ENST00000456717 146 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 MTND2P39-201ENST00000457230 764 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 RN7SL443P-201ENST00000464331 290 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 AC021193.1-201ENST00000511607 420 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 AC008562.1-201ENST00000521763 330 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AGGF1P9-201ENST00000561884 913 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 BGLT3-201ENST00000564523 994 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 AC019322.1-201ENST00000571869 389 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.05□□□□□ -1.44
RHBDL3P58872 MIR7703-201ENST00000620784 77 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.05□□□□□ -1.44
RHBDL3P58872 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.05□□□□□ -1.44
RHBDL3P58872 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDL3P58872 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDL3P58872 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RHBDL3P58872 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 MFSD8-216ENST00000641147 4009 ntBASIC6.05□□□□□ -1.44
RHBDL3P58872 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
RHBDL3P58872 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC6.04□□□□□ -1.44
RHBDL3P58872 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RHBDL3P58872 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDL3P58872 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 SNORA2.3-201ENST00000383920 135 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 SNORA77-201ENST00000408716 125 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.04□□□□□ -1.44
RHBDL3P58872 AC090018.1-201ENST00000434369 367 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDL3P58872 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.04□□□□□ -1.44
RHBDL3P58872 AC002542.1-201ENST00000440683 193 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 RPS7P5-201ENST00000441482 581 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 HSFY3P-201ENST00000444242 1191 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDL3P58872 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDL3P58872 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDL3P58872 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 AC112198.4-201ENST00000515450 351 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.04□□□□□ -1.44
RHBDL3P58872 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDL3P58872 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.04□□□□□ -1.44
RHBDL3P58872 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.04□□□□□ -1.44
RHBDL3P58872 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDL3P58872 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.04□□□□□ -1.44
RHBDL3P58872 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.04□□□□□ -1.44
RHBDL3P58872 EDDM3DP-201ENST00000554692 434 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.04□□□□□ -1.44
RHBDL3P58872 AC110743.1-201ENST00000584870 478 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 AC133794.1-201ENST00000602731 914 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 AL162574.1-201ENST00000615702 950 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 AC009318.3-201ENST00000616916 503 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 AL590396.2-201ENST00000636511 1041 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 AC004817.4-201ENST00000602396 3625 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 AL360270.2-201ENST00000562952 5985 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 AC114546.3-201ENST00000623582 1734 ntBASIC6.04□□□□□ -1.44
RHBDL3P58872 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.04□□□□□ -1.44
RHBDL3P58872 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RHBDL3P58872 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDL3P58872 AC073055.1-201ENST00000456901 1621 ntBASIC6.03□□□□□ -1.44
RHBDL3P58872 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
RHBDL3P58872 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.03□□□□□ -1.44
RHBDL3P58872 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDL3P58872 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDL3P58872 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms