Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
LIM2P55344 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.34□□□□□ -1.71
LIM2P55344 AL590139.1-201ENST00000416267 400 ntBASIC4.34□□□□□ -1.71
LIM2P55344 GNG5P5-201ENST00000420444 220 ntBASIC4.34□□□□□ -1.71
LIM2P55344 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.34□□□□□ -1.71
LIM2P55344 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.34□□□□□ -1.71
LIM2P55344 Z99127.2-201ENST00000441426 334 ntBASIC4.34□□□□□ -1.71
LIM2P55344 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.34□□□□□ -1.71
LIM2P55344 RN7SL354P-201ENST00000469282 294 ntBASIC4.34□□□□□ -1.71
LIM2P55344 RN7SL817P-201ENST00000480777 288 ntBASIC4.34□□□□□ -1.71
LIM2P55344 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.34□□□□□ -1.71
LIM2P55344 PCNAP1-201ENST00000505363 709 ntBASIC4.34□□□□□ -1.71
LIM2P55344 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.34□□□□□ -1.71
LIM2P55344 AC108157.1-201ENST00000510511 539 ntBASIC4.34□□□□□ -1.71
LIM2P55344 RNU6-760P-201ENST00000516078 97 ntBASIC4.34□□□□□ -1.71
LIM2P55344 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.34□□□□□ -1.71
LIM2P55344 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.34□□□□□ -1.71
LIM2P55344 AC063949.1-201ENST00000552900 865 ntBASIC4.34□□□□□ -1.71
LIM2P55344 RPL21P7-201ENST00000557463 483 ntBASIC4.34□□□□□ -1.71
LIM2P55344 ATP5J2P6-201ENST00000565203 266 ntBASIC4.34□□□□□ -1.71
LIM2P55344 AC122134.1-201ENST00000565664 1104 ntBASIC4.34□□□□□ -1.71
LIM2P55344 AC233702.9-201ENST00000581528 203 ntBASIC4.34□□□□□ -1.71
LIM2P55344 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.34□□□□□ -1.71
LIM2P55344 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.34□□□□□ -1.71
LIM2P55344 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.34□□□□□ -1.71
LIM2P55344 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.34□□□□□ -1.71
LIM2P55344 AL139254.3-201ENST00000641097 674 ntBASIC4.34□□□□□ -1.71
LIM2P55344 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LIM2P55344 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.34□□□□□ -1.71
LIM2P55344 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LIM2P55344 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LIM2P55344 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
LIM2P55344 AC125257.1-201ENST00000560400 2930 ntBASIC4.34□□□□□ -1.72
LIM2P55344 OR14L1P-202ENST00000641545 3009 ntBASIC4.34□□□□□ -1.72
LIM2P55344 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LIM2P55344 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.34□□□□□ -1.72
LIM2P55344 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LIM2P55344 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
LIM2P55344 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
LIM2P55344 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 EOGT-210ENST00000615922 1931 ntBASIC4.33□□□□□ -1.72
LIM2P55344 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.33□□□□□ -1.72
LIM2P55344 HSPD1P14-201ENST00000432666 1618 ntBASIC4.33□□□□□ -1.72
LIM2P55344 AP001002.1-201ENST00000625148 1513 ntBASIC4.33□□□□□ -1.72
LIM2P55344 OR5T3-201ENST00000303059 1023 ntBASIC4.33□□□□□ -1.72
LIM2P55344 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LIM2P55344 RNU1-20P-201ENST00000363314 162 ntBASIC4.33□□□□□ -1.72
LIM2P55344 SNORD113.2-201ENST00000364166 89 ntBASIC4.33□□□□□ -1.72
LIM2P55344 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 BTF3P9-201ENST00000418784 283 ntBASIC4.33□□□□□ -1.72
LIM2P55344 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.33□□□□□ -1.72
LIM2P55344 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.33□□□□□ -1.72
LIM2P55344 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.33□□□□□ -1.72
LIM2P55344 AL590623.1-201ENST00000427864 105 ntBASIC4.33□□□□□ -1.72
LIM2P55344 YWHAZP2-201ENST00000440317 728 ntBASIC4.33□□□□□ -1.72
LIM2P55344 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.33□□□□□ -1.72
LIM2P55344 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 MTND3P4-201ENST00000453537 303 ntBASIC4.33□□□□□ -1.72
LIM2P55344 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.33□□□□□ -1.72
LIM2P55344 HSPE1P22-201ENST00000456856 327 ntBASIC4.33□□□□□ -1.72
LIM2P55344 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.33□□□□□ -1.72
LIM2P55344 ATP5G1P3-201ENST00000463301 410 ntBASIC4.33□□□□□ -1.72
LIM2P55344 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.33□□□□□ -1.72
LIM2P55344 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.33□□□□□ -1.72
LIM2P55344 AC021146.3-201ENST00000511911 260 ntBASIC4.33□□□□□ -1.72
LIM2P55344 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.33□□□□□ -1.72
LIM2P55344 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.33□□□□□ -1.72
LIM2P55344 AC105105.5-201ENST00000622635 1294 ntBASIC4.33□□□□□ -1.72
LIM2P55344 AC021106.3-201ENST00000623925 531 ntBASIC4.33□□□□□ -1.72
LIM2P55344 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.33□□□□□ -1.72
LIM2P55344 AC092159.4-201ENST00000624944 550 ntBASIC4.33□□□□□ -1.72
LIM2P55344 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.33□□□□□ -1.72
LIM2P55344 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.33□□□□□ -1.72
LIM2P55344 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LIM2P55344 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIM2P55344 PCAT14-202ENST00000627127 3935 ntBASIC4.32□□□□□ -1.72
LIM2P55344 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LIM2P55344 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LIM2P55344 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.32□□□□□ -1.72
LIM2P55344 AC012618.3-205ENST00000637896 1496 ntBASIC4.32□□□□□ -1.72
LIM2P55344 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIM2P55344 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LIM2P55344 OR4K15-201ENST00000305051 1216 ntBASIC4.32□□□□□ -1.72
LIM2P55344 IL6STP1-201ENST00000346911 1020 ntBASIC4.32□□□□□ -1.72
LIM2P55344 RNU6-152P-201ENST00000384037 107 ntBASIC4.32□□□□□ -1.72
LIM2P55344 MIR585-201ENST00000384887 94 ntBASIC4.32□□□□□ -1.72
LIM2P55344 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.32□□□□□ -1.72
LIM2P55344 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.32□□□□□ -1.72
LIM2P55344 CYB5AP4-201ENST00000396692 399 ntBASIC4.32□□□□□ -1.72
LIM2P55344 AL034403.1-201ENST00000399414 885 ntBASIC4.32□□□□□ -1.72
LIM2P55344 OR1F12-201ENST00000402365 945 ntBASIC4.32□□□□□ -1.72
LIM2P55344 RPS16P5-201ENST00000406501 404 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms