Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
ATN1P54259 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
ATN1P54259 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
ATN1P54259 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
ATN1P54259 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
ATN1P54259 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.49□□□□□ -1.05
ATN1P54259 RNU6-1255P-201ENST00000363434 112 ntBASIC8.49□□□□□ -1.05
ATN1P54259 RNU4-50P-201ENST00000364361 141 ntBASIC8.49□□□□□ -1.05
ATN1P54259 RNU6-343P-201ENST00000364709 104 ntBASIC8.49□□□□□ -1.05
ATN1P54259 MIR551B-201ENST00000384984 96 ntBASIC8.49□□□□□ -1.05
ATN1P54259 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
ATN1P54259 H2AFZP3-201ENST00000394213 387 ntBASIC8.49□□□□□ -1.05
ATN1P54259 AC011933.1-201ENST00000413334 321 ntBASIC8.49□□□□□ -1.05
ATN1P54259 HCG25-217ENST00000422366 702 ntTSL 3 BASIC8.49□□□□□ -1.05
ATN1P54259 HIGD1AP11-201ENST00000438361 280 ntBASIC8.49□□□□□ -1.05
ATN1P54259 UBE2V1P5-201ENST00000440070 405 ntBASIC8.49□□□□□ -1.05
ATN1P54259 AC005517.1-201ENST00000452091 489 ntBASIC8.49□□□□□ -1.05
ATN1P54259 RPL21P104-201ENST00000464143 478 ntBASIC8.49□□□□□ -1.05
ATN1P54259 AC044810.1-201ENST00000480271 711 ntBASIC8.49□□□□□ -1.05
ATN1P54259 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC8.49□□□□□ -1.05
ATN1P54259 RNA5SP503-201ENST00000517047 117 ntBASIC8.49□□□□□ -1.05
ATN1P54259 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC8.49□□□□□ -1.05
ATN1P54259 COX6CP8-201ENST00000522620 226 ntBASIC8.49□□□□□ -1.05
ATN1P54259 AC024405.2-202ENST00000532731 184 ntBASIC8.49□□□□□ -1.05
ATN1P54259 MRPS36P4-201ENST00000534436 298 ntBASIC8.49□□□□□ -1.05
ATN1P54259 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC8.49□□□□□ -1.05
ATN1P54259 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC8.49□□□□□ -1.05
ATN1P54259 AC090607.2-201ENST00000560331 695 ntBASIC8.49□□□□□ -1.05
ATN1P54259 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.49□□□□□ -1.05
ATN1P54259 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC8.49□□□□□ -1.05
ATN1P54259 AC009779.8-202ENST00000607990 932 ntBASIC8.49□□□□□ -1.05
ATN1P54259 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.49□□□□□ -1.05
ATN1P54259 AL445363.3-201ENST00000623080 671 ntBASIC8.49□□□□□ -1.05
ATN1P54259 AL450472.1-202ENST00000637286 180 ntBASIC8.49□□□□□ -1.05
ATN1P54259 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
ATN1P54259 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
ATN1P54259 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
ATN1P54259 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.49□□□□□ -1.05
ATN1P54259 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.49□□□□□ -1.05
ATN1P54259 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
ATN1P54259 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.49□□□□□ -1.05
ATN1P54259 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC8.49□□□□□ -1.05
ATN1P54259 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
ATN1P54259 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
ATN1P54259 AC022507.1-201ENST00000548349 1505 ntBASIC8.49□□□□□ -1.05
ATN1P54259 RMST-202ENST00000541282 2099 ntTSL 2 BASIC8.49□□□□□ -1.05
ATN1P54259 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
ATN1P54259 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.48□□□□□ -1.05
ATN1P54259 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
ATN1P54259 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
ATN1P54259 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
ATN1P54259 AC130360.2-201ENST00000533477 1556 ntBASIC8.48□□□□□ -1.05
ATN1P54259 ERG-206ENST00000398911 4914 ntTSL 5 BASIC8.48□□□□□ -1.05
ATN1P54259 ZNF806-201ENST00000438300 1774 ntBASIC8.48□□□□□ -1.05
ATN1P54259 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
ATN1P54259 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ATN1P54259 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
ATN1P54259 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.48□□□□□ -1.05
ATN1P54259 Y_RNA.22-201ENST00000362492 102 ntBASIC8.48□□□□□ -1.05
ATN1P54259 RNU6-115P-201ENST00000364310 107 ntBASIC8.48□□□□□ -1.05
ATN1P54259 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC8.48□□□□□ -1.05
ATN1P54259 PPIAP26-201ENST00000377951 522 ntBASIC8.48□□□□□ -1.05
ATN1P54259 RNU6-244P-201ENST00000391028 104 ntBASIC8.48□□□□□ -1.05
ATN1P54259 RNU2-33P-201ENST00000410344 192 ntBASIC8.48□□□□□ -1.05
ATN1P54259 OR4C10P-201ENST00000434991 931 ntBASIC8.48□□□□□ -1.05
ATN1P54259 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC8.48□□□□□ -1.05
ATN1P54259 AL031663.1-201ENST00000437445 219 ntBASIC8.48□□□□□ -1.05
ATN1P54259 LIN28AP2-201ENST00000445283 458 ntBASIC8.48□□□□□ -1.05
ATN1P54259 CHEK2P4-201ENST00000450340 246 ntBASIC8.48□□□□□ -1.05
ATN1P54259 GAS5-223ENST00000452197 483 ntTSL 3 BASIC8.48□□□□□ -1.05
ATN1P54259 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.48□□□□□ -1.05
ATN1P54259 SNORD5.1-201ENST00000458800 75 ntBASIC8.48□□□□□ -1.05
ATN1P54259 AC109925.1-201ENST00000478069 331 ntBASIC8.48□□□□□ -1.05
ATN1P54259 AC084878.1-201ENST00000480555 648 ntBASIC8.48□□□□□ -1.05
ATN1P54259 AP001025.2-201ENST00000490908 477 ntBASIC8.48□□□□□ -1.05
ATN1P54259 MAL2-201ENST00000522112 573 ntTSL 4 BASIC8.48□□□□□ -1.05
ATN1P54259 AC107952.1-201ENST00000524200 376 ntBASIC8.48□□□□□ -1.05
ATN1P54259 LSM3P2-201ENST00000551246 273 ntBASIC8.48□□□□□ -1.05
ATN1P54259 AC079363.1-201ENST00000551366 1125 ntBASIC8.48□□□□□ -1.05
ATN1P54259 PPIAP6-201ENST00000557078 499 ntBASIC8.48□□□□□ -1.05
ATN1P54259 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.48□□□□□ -1.05
ATN1P54259 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.48□□□□□ -1.05
ATN1P54259 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC8.48□□□□□ -1.05
ATN1P54259 AL365222.1-201ENST00000614661 98 ntBASIC8.48□□□□□ -1.05
ATN1P54259 AC026336.5-201ENST00000624455 738 ntBASIC8.48□□□□□ -1.05
ATN1P54259 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.48□□□□□ -1.05
ATN1P54259 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
ATN1P54259 AC046144.1-201ENST00000478559 1853 ntBASIC8.48□□□□□ -1.05
ATN1P54259 CASC19-284ENST00000642142 1868 ntBASIC8.48□□□□□ -1.05
ATN1P54259 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ATN1P54259 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.48□□□□□ -1.05
ATN1P54259 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
ATN1P54259 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ATN1P54259 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
ATN1P54259 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC8.48□□□□□ -1.05
ATN1P54259 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC8.48□□□□□ -1.05
ATN1P54259 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC8.48□□□□□ -1.05
ATN1P54259 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
ATN1P54259 AC008669.1-201ENST00000565823 2178 ntBASIC8.48□□□□□ -1.05
ATN1P54259 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms