Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RNU11-4P-201ENST00000391149 133 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.17□□□□□ -1.42
CLTCL1P53675 OR13Z1P-201ENST00000416141 834 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 RPS29P7-201ENST00000439662 171 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 ARAFP2-201ENST00000440565 559 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC6.17□□□□□ -1.42
CLTCL1P53675 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.17□□□□□ -1.42
CLTCL1P53675 RPL23AP2-201ENST00000471227 466 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 TVP23BP1-201ENST00000557500 617 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC6.17□□□□□ -1.42
CLTCL1P53675 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.17□□□□□ -1.42
CLTCL1P53675 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLTCL1P53675 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLTCL1P53675 AC097461.1-201ENST00000568928 2821 ntBASIC6.17□□□□□ -1.42
CLTCL1P53675 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CLTCL1P53675 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.16□□□□□ -1.42
CLTCL1P53675 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLTCL1P53675 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLTCL1P53675 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLTCL1P53675 MT-RNR1-201ENST00000389680 954 ntBASIC6.16□□□□□ -1.42
CLTCL1P53675 RPL36AP10-201ENST00000421785 322 ntBASIC6.16□□□□□ -1.42
CLTCL1P53675 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC6.16□□□□□ -1.42
CLTCL1P53675 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.16□□□□□ -1.42
CLTCL1P53675 TPT1P1-201ENST00000458495 518 ntBASIC6.16□□□□□ -1.42
CLTCL1P53675 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.16□□□□□ -1.42
CLTCL1P53675 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.16□□□□□ -1.42
CLTCL1P53675 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.16□□□□□ -1.42
CLTCL1P53675 CDRT1-208ENST00000630868 794 ntBASIC6.16□□□□□ -1.42
CLTCL1P53675 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLTCL1P53675 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLTCL1P53675 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLTCL1P53675 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.15□□□□□ -1.42
CLTCL1P53675 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLTCL1P53675 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLTCL1P53675 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CLTCL1P53675 SUPT16HP1-201ENST00000537175 3133 ntBASIC6.15□□□□□ -1.42
CLTCL1P53675 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CLTCL1P53675 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.15□□□□□ -1.42
CLTCL1P53675 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CLTCL1P53675 AL162151.2-201ENST00000448875 158 ntBASIC6.15□□□□□ -1.42
CLTCL1P53675 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC6.15□□□□□ -1.42
CLTCL1P53675 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.15□□□□□ -1.42
CLTCL1P53675 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CLTCL1P53675 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CLTCL1P53675 AL161912.2-201ENST00000565707 3007 ntBASIC6.15□□□□□ -1.43
CLTCL1P53675 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLTCL1P53675 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.15□□□□□ -1.43
CLTCL1P53675 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CLTCL1P53675 RLIMP1-201ENST00000339626 1680 ntBASIC6.15□□□□□ -1.43
CLTCL1P53675 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CLTCL1P53675 NCOA4P2-201ENST00000340589 1813 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLTCL1P53675 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLTCL1P53675 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLTCL1P53675 RNA5SP171-201ENST00000391071 115 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 AL359643.1-201ENST00000404109 423 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.14□□□□□ -1.43
CLTCL1P53675 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.14□□□□□ -1.43
CLTCL1P53675 SAP18P1-201ENST00000512058 390 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 OR7E10P-201ENST00000526420 991 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 DYNLL1P4-201ENST00000549314 266 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 AL021997.2-201ENST00000615674 271 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLTCL1P53675 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
CLTCL1P53675 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.14□□□□□ -1.43
CLTCL1P53675 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CLTCL1P53675 AP001002.1-201ENST00000625148 1513 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.14□□□□□ -1.43
CLTCL1P53675 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLTCL1P53675 MFSD8-242ENST00000641690 4199 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLTCL1P53675 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLTCL1P53675 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLTCL1P53675 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.14□□□□□ -1.43
CLTCL1P53675 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLTCL1P53675 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLTCL1P53675 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CLTCL1P53675 RNU1-20P-201ENST00000363314 162 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CLTCL1P53675 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.14□□□□□ -1.43
CLTCL1P53675 RN7SKP182-201ENST00000410772 298 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 AC115285.1-201ENST00000424879 736 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 TBCAP1-201ENST00000436520 327 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.14□□□□□ -1.43
CLTCL1P53675 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC6.14□□□□□ -1.43
CLTCL1P53675 AC090013.1-201ENST00000485147 480 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 PARP4P3-201ENST00000510265 317 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.14□□□□□ -1.43
CLTCL1P53675 MIR6875-201ENST00000617506 72 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 AC022106.2-201ENST00000620114 757 ntBASIC6.14□□□□□ -1.43
CLTCL1P53675 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.13□□□□□ -1.43
CLTCL1P53675 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CLTCL1P53675 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.13□□□□□ -1.43
CLTCL1P53675 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.13□□□□□ -1.43
CLTCL1P53675 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.13□□□□□ -1.43
CLTCL1P53675 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CLTCL1P53675 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CLTCL1P53675 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLTCL1P53675 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLTCL1P53675 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms