Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
EFNA3P52797 AL138787.1-202ENST00000437804 898 ntBASIC4.38□□□□□ -1.71
EFNA3P52797 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.38□□□□□ -1.71
EFNA3P52797 BUD31P2-201ENST00000449374 300 ntBASIC4.38□□□□□ -1.71
EFNA3P52797 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.38□□□□□ -1.71
EFNA3P52797 CEACAMP10-202ENST00000495431 496 ntBASIC4.38□□□□□ -1.71
EFNA3P52797 RPS27AP18-201ENST00000515536 459 ntBASIC4.38□□□□□ -1.71
EFNA3P52797 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.38□□□□□ -1.71
EFNA3P52797 AC026616.1-201ENST00000523157 525 ntBASIC4.38□□□□□ -1.71
EFNA3P52797 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.38□□□□□ -1.71
EFNA3P52797 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.38□□□□□ -1.71
EFNA3P52797 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.38□□□□□ -1.71
EFNA3P52797 AC068831.4-201ENST00000556118 109 ntBASIC4.38□□□□□ -1.71
EFNA3P52797 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.38□□□□□ -1.71
EFNA3P52797 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.38□□□□□ -1.71
EFNA3P52797 HMGB1P51-201ENST00000605166 638 ntBASIC4.38□□□□□ -1.71
EFNA3P52797 MIR378J-201ENST00000611988 109 ntBASIC4.38□□□□□ -1.71
EFNA3P52797 AC004232.3-201ENST00000622977 525 ntBASIC4.38□□□□□ -1.71
EFNA3P52797 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.38□□□□□ -1.71
EFNA3P52797 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
EFNA3P52797 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
EFNA3P52797 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
EFNA3P52797 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
EFNA3P52797 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.38□□□□□ -1.71
EFNA3P52797 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
EFNA3P52797 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
EFNA3P52797 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.38□□□□□ -1.71
EFNA3P52797 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.38□□□□□ -1.71
EFNA3P52797 AC107068.1-201ENST00000563286 4218 ntBASIC4.38□□□□□ -1.71
EFNA3P52797 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
EFNA3P52797 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
EFNA3P52797 KARSP3-201ENST00000571212 1504 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AL031119.1-201ENST00000404707 1879 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AL034370.1-201ENST00000397254 1590 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EFNA3P52797 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
EFNA3P52797 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
EFNA3P52797 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EFNA3P52797 MT-RNR1-201ENST00000389680 954 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 RNA5SP105-201ENST00000391123 113 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 NPM1P10-201ENST00000398310 865 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.37□□□□□ -1.71
EFNA3P52797 DNAJC19P7-201ENST00000428811 344 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.37□□□□□ -1.71
EFNA3P52797 YWHAZP2-201ENST00000440317 728 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 MORF4L1P4-201ENST00000450245 976 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 CYCSP42-201ENST00000450823 238 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 MTND3P4-201ENST00000453537 303 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.37□□□□□ -1.71
EFNA3P52797 RNA5SP103-201ENST00000459503 118 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.37□□□□□ -1.71
EFNA3P52797 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
EFNA3P52797 RN7SL481P-201ENST00000477764 299 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.37□□□□□ -1.71
EFNA3P52797 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.37□□□□□ -1.71
EFNA3P52797 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.37□□□□□ -1.71
EFNA3P52797 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.37□□□□□ -1.71
EFNA3P52797 AC007016.1-201ENST00000512110 244 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AC117525.1-201ENST00000515228 503 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AC067904.2-201ENST00000517322 1283 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.37□□□□□ -1.71
EFNA3P52797 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.37□□□□□ -1.71
EFNA3P52797 OR4V1P-201ENST00000525394 1140 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AP001781.1-201ENST00000530977 207 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AC092868.3-201ENST00000560515 784 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.37□□□□□ -1.71
EFNA3P52797 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.37□□□□□ -1.71
EFNA3P52797 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.37□□□□□ -1.71
EFNA3P52797 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EFNA3P52797 AC245128.3-201ENST00000594721 748 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AL135786.2-201ENST00000608422 615 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
EFNA3P52797 AC015914.2-201ENST00000618167 288 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.37□□□□□ -1.71
EFNA3P52797 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.37□□□□□ -1.71
EFNA3P52797 AL606537.1-201ENST00000607258 2011 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EFNA3P52797 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
EFNA3P52797 DDX18P5-201ENST00000534547 1306 ntBASIC4.37□□□□□ -1.71
EFNA3P52797 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.37□□□□□ -1.71
EFNA3P52797 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
EFNA3P52797 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
EFNA3P52797 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.37□□□□□ -1.71
EFNA3P52797 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EFNA3P52797 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNA3P52797 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EFNA3P52797 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
EFNA3P52797 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EFNA3P52797 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EFNA3P52797 AL121950.1-201ENST00000624993 2077 ntBASIC4.36□□□□□ -1.71
EFNA3P52797 AL672167.1-204ENST00000641875 3017 ntBASIC4.36□□□□□ -1.71
EFNA3P52797 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
EFNA3P52797 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
EFNA3P52797 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNA3P52797 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNA3P52797 OR4K15-201ENST00000305051 1216 ntBASIC4.36□□□□□ -1.71
EFNA3P52797 FAM3C2-201ENST00000312214 681 ntBASIC4.36□□□□□ -1.71
EFNA3P52797 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EFNA3P52797 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EFNA3P52797 RN7SKP224-201ENST00000364140 325 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms