Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC4.6□□□□□ -1.67
BRCA2P51587 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRCA2P51587 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRCA2P51587 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
BRCA2P51587 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
BRCA2P51587 AC017083.1-201ENST00000428093 483 ntBASIC4.59□□□□□ -1.67
BRCA2P51587 AL136126.1-201ENST00000473603 402 ntBASIC4.59□□□□□ -1.67
BRCA2P51587 AC017015.1-201ENST00000477387 286 ntBASIC4.59□□□□□ -1.67
BRCA2P51587 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.59□□□□□ -1.67
BRCA2P51587 RN7SKP57-201ENST00000517248 293 ntBASIC4.59□□□□□ -1.67
BRCA2P51587 MIR6868-201ENST00000611215 58 ntBASIC4.59□□□□□ -1.67
BRCA2P51587 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRCA2P51587 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
BRCA2P51587 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
BRCA2P51587 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRCA2P51587 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRCA2P51587 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
BRCA2P51587 PRO1804-201ENST00000623780 2050 ntBASIC4.59□□□□□ -1.67
BRCA2P51587 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRCA2P51587 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRCA2P51587 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRCA2P51587 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRCA2P51587 BTF3P6-201ENST00000448054 499 ntBASIC4.59□□□□□ -1.67
BRCA2P51587 OR9M1P-201ENST00000459641 921 ntBASIC4.59□□□□□ -1.67
BRCA2P51587 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.59□□□□□ -1.67
BRCA2P51587 EIF4BP1-201ENST00000554881 351 ntBASIC4.59□□□□□ -1.67
BRCA2P51587 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.59□□□□□ -1.67
BRCA2P51587 YPEL5P2-201ENST00000605553 359 ntBASIC4.59□□□□□ -1.67
BRCA2P51587 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRCA2P51587 AC104260.2-201ENST00000623551 3497 ntBASIC4.59□□□□□ -1.67
BRCA2P51587 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRCA2P51587 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
BRCA2P51587 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
BRCA2P51587 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
BRCA2P51587 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
BRCA2P51587 AC005300.1-201ENST00000428401 373 ntBASIC4.59□□□□□ -1.68
BRCA2P51587 RPL21P91-201ENST00000429231 479 ntBASIC4.59□□□□□ -1.68
BRCA2P51587 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC4.59□□□□□ -1.68
BRCA2P51587 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.59□□□□□ -1.68
BRCA2P51587 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
BRCA2P51587 MIR4672-201ENST00000583126 81 ntBASIC4.59□□□□□ -1.68
BRCA2P51587 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
BRCA2P51587 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.59□□□□□ -1.68
BRCA2P51587 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
BRCA2P51587 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
BRCA2P51587 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC4.58□□□□□ -1.68
BRCA2P51587 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
BRCA2P51587 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 AC104333.2-201ENST00000422630 192 ntBASIC4.58□□□□□ -1.68
BRCA2P51587 AL512649.1-201ENST00000428997 581 ntBASIC4.58□□□□□ -1.68
BRCA2P51587 AC093166.2-201ENST00000455969 1017 ntBASIC4.58□□□□□ -1.68
BRCA2P51587 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.58□□□□□ -1.68
BRCA2P51587 AC244505.7-201ENST00000599675 272 ntBASIC4.58□□□□□ -1.68
BRCA2P51587 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.58□□□□□ -1.68
BRCA2P51587 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 RNU2-65P-201ENST00000410162 185 ntBASIC4.58□□□□□ -1.68
BRCA2P51587 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
BRCA2P51587 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.58□□□□□ -1.68
BRCA2P51587 RPS4XP4-201ENST00000443195 763 ntBASIC4.58□□□□□ -1.68
BRCA2P51587 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.58□□□□□ -1.68
BRCA2P51587 SETP14-201ENST00000497538 873 ntBASIC4.58□□□□□ -1.68
BRCA2P51587 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
BRCA2P51587 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC4.58□□□□□ -1.68
BRCA2P51587 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.58□□□□□ -1.68
BRCA2P51587 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
BRCA2P51587 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
BRCA2P51587 AL391219.1-201ENST00000422570 483 ntBASIC4.58□□□□□ -1.68
BRCA2P51587 RPL21P8-201ENST00000465083 535 ntBASIC4.58□□□□□ -1.68
BRCA2P51587 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.58□□□□□ -1.68
BRCA2P51587 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.58□□□□□ -1.68
BRCA2P51587 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRCA2P51587 AL034370.1-201ENST00000397254 1590 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.57□□□□□ -1.68
BRCA2P51587 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
BRCA2P51587 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRCA2P51587 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRCA2P51587 AC116667.1-201ENST00000604855 2072 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.57□□□□□ -1.68
BRCA2P51587 OR52E3P-201ENST00000452083 936 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 HPRT1P2-201ENST00000505250 544 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.57□□□□□ -1.68
BRCA2P51587 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.57□□□□□ -1.68
BRCA2P51587 MTCO3P22-201ENST00000603219 784 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.57□□□□□ -1.68
BRCA2P51587 AL133383.2-201ENST00000622958 2336 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 AL672167.1-204ENST00000641875 3017 ntBASIC4.57□□□□□ -1.68
BRCA2P51587 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.57□□□□□ -1.68
BRCA2P51587 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms