Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.9□□□□□ -1.63
CASP4P49662 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.9□□□□□ -1.63
CASP4P49662 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.9□□□□□ -1.63
CASP4P49662 SNORD39.2-201ENST00000579995 76 ntBASIC4.9□□□□□ -1.63
CASP4P49662 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.9□□□□□ -1.63
CASP4P49662 AL353726.1-201ENST00000614041 1000 ntBASIC4.9□□□□□ -1.63
CASP4P49662 AL133243.1-201ENST00000614487 366 ntBASIC4.9□□□□□ -1.63
CASP4P49662 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CASP4P49662 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.9□□□□□ -1.63
CASP4P49662 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.9□□□□□ -1.63
CASP4P49662 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CASP4P49662 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CASP4P49662 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CASP4P49662 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.9□□□□□ -1.63
CASP4P49662 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.9□□□□□ -1.63
CASP4P49662 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.89□□□□□ -1.63
CASP4P49662 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.89□□□□□ -1.63
CASP4P49662 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CASP4P49662 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CASP4P49662 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CASP4P49662 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CASP4P49662 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.89□□□□□ -1.63
CASP4P49662 RNU6-1320P-201ENST00000390838 107 ntBASIC4.89□□□□□ -1.63
CASP4P49662 RNU6-1269P-201ENST00000391139 107 ntBASIC4.89□□□□□ -1.63
CASP4P49662 AC092570.3-201ENST00000420113 693 ntBASIC4.89□□□□□ -1.63
CASP4P49662 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.89□□□□□ -1.63
CASP4P49662 UQCRBP1-201ENST00000421129 336 ntBASIC4.89□□□□□ -1.63
CASP4P49662 ARAFP1-201ENST00000422172 605 ntBASIC4.89□□□□□ -1.63
CASP4P49662 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.89□□□□□ -1.63
CASP4P49662 TMX2P1-201ENST00000436507 708 ntBASIC4.89□□□□□ -1.63
CASP4P49662 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.89□□□□□ -1.63
CASP4P49662 RNU6-599P-201ENST00000459383 107 ntBASIC4.89□□□□□ -1.63
CASP4P49662 RNU6-1193P-201ENST00000459461 107 ntBASIC4.89□□□□□ -1.63
CASP4P49662 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.89□□□□□ -1.63
CASP4P49662 RPL21P126-201ENST00000470049 478 ntBASIC4.89□□□□□ -1.63
CASP4P49662 RN7SL817P-201ENST00000480777 288 ntBASIC4.89□□□□□ -1.63
CASP4P49662 AC090013.1-201ENST00000485147 480 ntBASIC4.89□□□□□ -1.63
CASP4P49662 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.89□□□□□ -1.63
CASP4P49662 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CASP4P49662 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CASP4P49662 CCNHP1-201ENST00000513311 678 ntBASIC4.89□□□□□ -1.63
CASP4P49662 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.89□□□□□ -1.63
CASP4P49662 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CASP4P49662 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CASP4P49662 HMGB2P1-201ENST00000591146 634 ntBASIC4.89□□□□□ -1.63
CASP4P49662 AL160290.3-201ENST00000604869 165 ntBASIC4.89□□□□□ -1.63
CASP4P49662 RNU6-368P-201ENST00000620928 107 ntBASIC4.89□□□□□ -1.63
CASP4P49662 RNU6-538P-201ENST00000622329 107 ntBASIC4.89□□□□□ -1.63
CASP4P49662 AP000346.3-201ENST00000622821 210 ntBASIC4.89□□□□□ -1.63
CASP4P49662 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.89□□□□□ -1.63
CASP4P49662 LINC01808-202ENST00000641680 1116 ntBASIC4.89□□□□□ -1.63
CASP4P49662 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CASP4P49662 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CASP4P49662 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.89□□□□□ -1.63
CASP4P49662 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CASP4P49662 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CASP4P49662 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CASP4P49662 AC125257.1-201ENST00000560400 2930 ntBASIC4.89□□□□□ -1.63
CASP4P49662 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CASP4P49662 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
CASP4P49662 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.88□□□□□ -1.63
CASP4P49662 AC053481.2-202ENST00000582394 1500 ntBASIC4.88□□□□□ -1.63
CASP4P49662 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CASP4P49662 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.88□□□□□ -1.63
CASP4P49662 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CASP4P49662 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CASP4P49662 OR4K15-201ENST00000305051 1216 ntBASIC4.88□□□□□ -1.63
CASP4P49662 RNU1-130P-201ENST00000363930 160 ntBASIC4.88□□□□□ -1.63
CASP4P49662 RNU6-1263P-201ENST00000384601 106 ntBASIC4.88□□□□□ -1.63
CASP4P49662 SDHCP2-201ENST00000398565 501 ntBASIC4.88□□□□□ -1.63
CASP4P49662 AC119751.6-201ENST00000416712 186 ntBASIC4.88□□□□□ -1.63
CASP4P49662 AL139095.3-201ENST00000419672 1203 ntBASIC4.88□□□□□ -1.63
CASP4P49662 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.88□□□□□ -1.63
CASP4P49662 NPM1P26-201ENST00000426339 738 ntBASIC4.88□□□□□ -1.63
CASP4P49662 RPL23AP1-201ENST00000428990 471 ntBASIC4.88□□□□□ -1.63
CASP4P49662 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.88□□□□□ -1.63
CASP4P49662 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.88□□□□□ -1.63
CASP4P49662 RPEP2-201ENST00000432149 701 ntBASIC4.88□□□□□ -1.63
CASP4P49662 HMGB3P10-201ENST00000434734 572 ntBASIC4.88□□□□□ -1.63
CASP4P49662 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.88□□□□□ -1.63
CASP4P49662 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.88□□□□□ -1.63
CASP4P49662 RPS27AP17-201ENST00000463344 455 ntBASIC4.88□□□□□ -1.63
CASP4P49662 AC107015.1-201ENST00000466902 747 ntBASIC4.88□□□□□ -1.63
CASP4P49662 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CASP4P49662 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.88□□□□□ -1.63
CASP4P49662 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.88□□□□□ -1.63
CASP4P49662 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.88□□□□□ -1.63
CASP4P49662 RPL21P7-201ENST00000557463 483 ntBASIC4.88□□□□□ -1.63
CASP4P49662 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CASP4P49662 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.88□□□□□ -1.63
CASP4P49662 AC084783.1-201ENST00000565846 910 ntBASIC4.88□□□□□ -1.63
CASP4P49662 AC069061.3-201ENST00000582254 823 ntBASIC4.88□□□□□ -1.63
CASP4P49662 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.88□□□□□ -1.63
CASP4P49662 AC008782.1-201ENST00000603386 430 ntBASIC4.88□□□□□ -1.63
CASP4P49662 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CASP4P49662 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CASP4P49662 AC006065.6-201ENST00000625201 545 ntBASIC4.88□□□□□ -1.63
CASP4P49662 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.88□□□□□ -1.63
CASP4P49662 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CASP4P49662 RAD17P1-201ENST00000418130 2042 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms