Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SRP9P49458 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SRP9P49458 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SRP9P49458 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SRP9P49458 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SRP9P49458 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.06□□□□□ -1.76
SRP9P49458 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SRP9P49458 RAC1P3-201ENST00000416129 580 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.06□□□□□ -1.76
SRP9P49458 RPS6P12-201ENST00000432491 726 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.06□□□□□ -1.76
SRP9P49458 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.06□□□□□ -1.76
SRP9P49458 RPL7P33-201ENST00000444159 742 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.06□□□□□ -1.76
SRP9P49458 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SRP9P49458 AC231760.1-201ENST00000498002 260 ntBASIC4.06□□□□□ -1.76
SRP9P49458 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.06□□□□□ -1.76
SRP9P49458 PPBPP1-201ENST00000510807 373 ntBASIC4.06□□□□□ -1.76
SRP9P49458 RNA5SP446-201ENST00000515955 82 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AP001880.2-201ENST00000538233 448 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.06□□□□□ -1.76
SRP9P49458 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.06□□□□□ -1.76
SRP9P49458 RN7SL802P-201ENST00000577858 299 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.06□□□□□ -1.76
SRP9P49458 MIR5699-201ENST00000578903 90 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AC091042.1-201ENST00000579213 173 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.06□□□□□ -1.76
SRP9P49458 MIR4443-201ENST00000585052 53 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AL391358.1-201ENST00000605342 190 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AC090948.2-201ENST00000607363 564 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AL353726.1-201ENST00000614041 1000 ntBASIC4.06□□□□□ -1.76
SRP9P49458 AP001784.1-201ENST00000624107 428 ntBASIC4.06□□□□□ -1.76
SRP9P49458 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.06□□□□□ -1.76
SRP9P49458 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.06□□□□□ -1.76
SRP9P49458 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
SRP9P49458 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.06□□□□□ -1.76
SRP9P49458 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SRP9P49458 AL355852.1-201ENST00000454081 1771 ntBASIC4.06□□□□□ -1.76
SRP9P49458 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SRP9P49458 AL121950.1-201ENST00000624993 2077 ntBASIC4.06□□□□□ -1.76
SRP9P49458 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.05□□□□□ -1.76
SRP9P49458 AC132825.1-201ENST00000463573 2247 ntBASIC4.05□□□□□ -1.76
SRP9P49458 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.05□□□□□ -1.76
SRP9P49458 MIR448-201ENST00000362131 111 ntBASIC4.05□□□□□ -1.76
SRP9P49458 RN7SKP115-201ENST00000363177 317 ntBASIC4.05□□□□□ -1.76
SRP9P49458 MIR298-201ENST00000401212 88 ntBASIC4.05□□□□□ -1.76
SRP9P49458 Z98745.1-201ENST00000402553 494 ntBASIC4.05□□□□□ -1.76
SRP9P49458 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.05□□□□□ -1.76
SRP9P49458 BX510359.2-201ENST00000417920 305 ntBASIC4.05□□□□□ -1.76
SRP9P49458 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.05□□□□□ -1.76
SRP9P49458 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.05□□□□□ -1.76
SRP9P49458 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.05□□□□□ -1.76
SRP9P49458 AC008072.1-201ENST00000434254 824 ntBASIC4.05□□□□□ -1.76
SRP9P49458 AC016831.4-201ENST00000438302 307 ntBASIC4.05□□□□□ -1.76
SRP9P49458 AC099063.2-201ENST00000446360 662 ntBASIC4.05□□□□□ -1.76
SRP9P49458 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.05□□□□□ -1.76
SRP9P49458 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.05□□□□□ -1.76
SRP9P49458 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.05□□□□□ -1.76
SRP9P49458 AC006967.1-201ENST00000467608 589 ntBASIC4.05□□□□□ -1.76
SRP9P49458 RPL23AP65-201ENST00000475608 468 ntBASIC4.05□□□□□ -1.76
SRP9P49458 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.05□□□□□ -1.76
SRP9P49458 AC108022.1-201ENST00000493466 478 ntBASIC4.05□□□□□ -1.76
SRP9P49458 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.05□□□□□ -1.76
SRP9P49458 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.05□□□□□ -1.76
SRP9P49458 AC018797.3-201ENST00000513388 1241 ntBASIC4.05□□□□□ -1.76
SRP9P49458 RN7SKP276-201ENST00000516242 268 ntBASIC4.05□□□□□ -1.76
SRP9P49458 snoU109.6-201ENST00000516831 118 ntBASIC4.05□□□□□ -1.76
SRP9P49458 IGKV1-32-201ENST00000519290 311 ntBASIC4.05□□□□□ -1.76
SRP9P49458 SOX5P1-201ENST00000524155 1127 ntBASIC4.05□□□□□ -1.76
SRP9P49458 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.05□□□□□ -1.76
SRP9P49458 AC135001.1-201ENST00000544546 283 ntBASIC4.05□□□□□ -1.76
SRP9P49458 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.05□□□□□ -1.76
SRP9P49458 AC008147.3-201ENST00000548666 354 ntBASIC4.05□□□□□ -1.76
SRP9P49458 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.05□□□□□ -1.76
SRP9P49458 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.05□□□□□ -1.76
SRP9P49458 UBE2FP2-201ENST00000566646 462 ntBASIC4.05□□□□□ -1.76
SRP9P49458 AC025946.2-201ENST00000603398 234 ntBASIC4.05□□□□□ -1.76
SRP9P49458 BX323046.1-201ENST00000610145 535 ntBASIC4.05□□□□□ -1.76
SRP9P49458 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.05□□□□□ -1.76
SRP9P49458 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SRP9P49458 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SRP9P49458 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.05□□□□□ -1.76
SRP9P49458 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SRP9P49458 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SRP9P49458 AL442639.1-201ENST00000625030 1899 ntBASIC4.05□□□□□ -1.76
SRP9P49458 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.04□□□□□ -1.76
SRP9P49458 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SRP9P49458 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.04□□□□□ -1.76
SRP9P49458 OR11H5P-202ENST00000641612 1325 ntBASIC4.04□□□□□ -1.76
SRP9P49458 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SRP9P49458 RNU6-1279P-201ENST00000383917 103 ntBASIC4.04□□□□□ -1.76
SRP9P49458 RN7SKP267-201ENST00000410381 285 ntBASIC4.04□□□□□ -1.76
SRP9P49458 RN7SKP216-201ENST00000411050 312 ntBASIC4.04□□□□□ -1.76
SRP9P49458 RN7SKP100-201ENST00000411258 284 ntBASIC4.04□□□□□ -1.76
SRP9P49458 AL591848.1-201ENST00000413092 322 ntBASIC4.04□□□□□ -1.76
SRP9P49458 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms