Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX2P48431 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 AC090114.3-201ENST00000479267 829 ntBASIC4.79□□□□□ -1.64
SOX2P48431 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 RNA5SP438-201ENST00000516561 112 ntBASIC4.79□□□□□ -1.64
SOX2P48431 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.79□□□□□ -1.64
SOX2P48431 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 IGJP1-201ENST00000522682 475 ntBASIC4.79□□□□□ -1.64
SOX2P48431 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.79□□□□□ -1.64
SOX2P48431 OR8G3P-201ENST00000533406 921 ntBASIC4.79□□□□□ -1.64
SOX2P48431 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SOX2P48431 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.79□□□□□ -1.64
SOX2P48431 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 AC079905.1-201ENST00000549280 475 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.79□□□□□ -1.64
SOX2P48431 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX2P48431 MIR4666A-201ENST00000580160 79 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX2P48431 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.79□□□□□ -1.64
SOX2P48431 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.79□□□□□ -1.64
SOX2P48431 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SOX2P48431 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 AP000769.2-201ENST00000602344 396 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AC146944.4-201ENST00000602697 718 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AC012557.2-201ENST00000605919 418 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AP001437.1-201ENST00000608783 456 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AP005137.2-201ENST00000609238 400 ntBASIC4.79□□□□□ -1.64
SOX2P48431 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.79□□□□□ -1.64
SOX2P48431 AC090246.1-201ENST00000616499 426 ntBASIC4.79□□□□□ -1.64
SOX2P48431 HTR1DP1-201ENST00000616500 888 ntBASIC4.79□□□□□ -1.64
SOX2P48431 AC092140.2-201ENST00000618027 521 ntBASIC4.79□□□□□ -1.64
SOX2P48431 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX2P48431 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.79□□□□□ -1.64
SOX2P48431 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SOX2P48431 AC073869.8-201ENST00000641806 335 ntBASIC4.79□□□□□ -1.64
SOX2P48431 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 MRE11P1-201ENST00000464884 2127 ntBASIC4.79□□□□□ -1.64
SOX2P48431 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SOX2P48431 AL353796.1-201ENST00000561542 3241 ntBASIC4.79□□□□□ -1.64
SOX2P48431 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.79□□□□□ -1.64
SOX2P48431 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SOX2P48431 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 DDX18P4-201ENST00000511690 1966 ntBASIC4.78□□□□□ -1.64
SOX2P48431 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
SOX2P48431 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.78□□□□□ -1.64
SOX2P48431 ADAM5-202ENST00000399789 1942 ntBASIC4.78□□□□□ -1.64
SOX2P48431 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX2P48431 MRRFP1-201ENST00000435941 1675 ntBASIC4.78□□□□□ -1.64
SOX2P48431 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SOX2P48431 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SOX2P48431 RNA5SP273-201ENST00000362484 113 ntBASIC4.78□□□□□ -1.64
SOX2P48431 U3.7-201ENST00000363668 216 ntBASIC4.78□□□□□ -1.64
SOX2P48431 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 BMS1P3-201ENST00000372011 932 ntBASIC4.78□□□□□ -1.64
SOX2P48431 OR1L1-202ENST00000373686 1083 ntBASIC4.78□□□□□ -1.64
SOX2P48431 RNU6-157P-201ENST00000383957 107 ntBASIC4.78□□□□□ -1.64
SOX2P48431 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 RNU6-575P-201ENST00000411326 105 ntBASIC4.78□□□□□ -1.64
SOX2P48431 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX2P48431 GAPDHP49-201ENST00000421421 961 ntBASIC4.78□□□□□ -1.64
SOX2P48431 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX2P48431 AC007161.1-204ENST00000423039 460 ntBASIC4.78□□□□□ -1.64
SOX2P48431 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.78□□□□□ -1.64
SOX2P48431 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.78□□□□□ -1.64
SOX2P48431 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX2P48431 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX2P48431 AMYP1-201ENST00000440059 1023 ntBASIC4.78□□□□□ -1.64
SOX2P48431 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 BX248409.1-201ENST00000455497 255 ntBASIC4.78□□□□□ -1.64
SOX2P48431 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX2P48431 RPS17P15-201ENST00000475609 349 ntBASIC4.78□□□□□ -1.64
SOX2P48431 RPS3AP43-201ENST00000479743 781 ntBASIC4.78□□□□□ -1.64
SOX2P48431 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX2P48431 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SOX2P48431 OR5BM1P-201ENST00000512021 366 ntBASIC4.78□□□□□ -1.64
SOX2P48431 AC114781.3-201ENST00000512083 142 ntBASIC4.78□□□□□ -1.64
SOX2P48431 HSD3BP3-201ENST00000514706 994 ntBASIC4.78□□□□□ -1.64
SOX2P48431 Y_RNA.667-201ENST00000516212 107 ntBASIC4.78□□□□□ -1.64
SOX2P48431 SCARNA20.4-201ENST00000516969 131 ntBASIC4.78□□□□□ -1.64
SOX2P48431 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX2P48431 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.78□□□□□ -1.64
SOX2P48431 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.78□□□□□ -1.64
SOX2P48431 ELOCP32-201ENST00000548625 324 ntBASIC4.78□□□□□ -1.64
SOX2P48431 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.78□□□□□ -1.64
SOX2P48431 DUXAP1-201ENST00000556632 463 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms