Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 TBCAP2-201ENST00000416175 326 ntBASIC4.52□□□□□ -1.69
SOX3P41225 AC006065.1-201ENST00000422539 802 ntBASIC4.52□□□□□ -1.69
SOX3P41225 CKS1BP6-201ENST00000424932 240 ntBASIC4.52□□□□□ -1.69
SOX3P41225 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX3P41225 UBE2D3P3-201ENST00000426992 425 ntBASIC4.52□□□□□ -1.69
SOX3P41225 FABP7P2-201ENST00000429946 379 ntBASIC4.52□□□□□ -1.69
SOX3P41225 AC073052.1-201ENST00000440417 714 ntBASIC4.52□□□□□ -1.69
SOX3P41225 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX3P41225 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.52□□□□□ -1.69
SOX3P41225 AC234781.3-201ENST00000452540 973 ntBASIC4.52□□□□□ -1.69
SOX3P41225 AC069277.2-201ENST00000454211 432 ntBASIC4.52□□□□□ -1.69
SOX3P41225 RPL23AP56-201ENST00000460778 453 ntBASIC4.52□□□□□ -1.69
SOX3P41225 NPM1P17-201ENST00000479221 602 ntBASIC4.52□□□□□ -1.69
SOX3P41225 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX3P41225 NPM1P29-201ENST00000483112 803 ntBASIC4.52□□□□□ -1.69
SOX3P41225 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
SOX3P41225 AC092902.1-201ENST00000486999 259 ntBASIC4.52□□□□□ -1.69
SOX3P41225 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX3P41225 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.52□□□□□ -1.69
SOX3P41225 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX3P41225 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX3P41225 OR7H2P-201ENST00000513483 306 ntBASIC4.52□□□□□ -1.69
SOX3P41225 MTCYBP19-201ENST00000517463 1124 ntBASIC4.52□□□□□ -1.69
SOX3P41225 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.52□□□□□ -1.69
SOX3P41225 AC004923.2-201ENST00000529649 369 ntBASIC4.52□□□□□ -1.69
SOX3P41225 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX3P41225 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SOX3P41225 OSBPL9P3-201ENST00000534523 595 ntBASIC4.52□□□□□ -1.69
SOX3P41225 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX3P41225 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX3P41225 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX3P41225 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX3P41225 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX3P41225 AC093510.2-201ENST00000562820 896 ntBASIC4.52□□□□□ -1.69
SOX3P41225 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX3P41225 AC122134.1-202ENST00000569111 1201 ntBASIC4.52□□□□□ -1.69
SOX3P41225 DPRXP4-201ENST00000578053 568 ntBASIC4.52□□□□□ -1.69
SOX3P41225 MIR3667-201ENST00000581025 74 ntBASIC4.52□□□□□ -1.69
SOX3P41225 MIR4737-201ENST00000583979 81 ntBASIC4.52□□□□□ -1.69
SOX3P41225 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX3P41225 AC068020.1-201ENST00000594215 661 ntBASIC4.52□□□□□ -1.69
SOX3P41225 AC130352.1-201ENST00000602979 661 ntBASIC4.52□□□□□ -1.69
SOX3P41225 RNF138P2-201ENST00000603490 592 ntBASIC4.52□□□□□ -1.69
SOX3P41225 AC090617.9-201ENST00000623751 147 ntBASIC4.52□□□□□ -1.69
SOX3P41225 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX3P41225 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX3P41225 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SOX3P41225 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
SOX3P41225 AL133268.1-201ENST00000405676 1401 ntBASIC4.52□□□□□ -1.69
SOX3P41225 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.52□□□□□ -1.69
SOX3P41225 AC107068.1-201ENST00000563286 4218 ntBASIC4.52□□□□□ -1.69
SOX3P41225 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SOX3P41225 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.52□□□□□ -1.69
SOX3P41225 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX3P41225 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SOX3P41225 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SOX3P41225 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.51□□□□□ -1.69
SOX3P41225 SAMMSON-213ENST00000641336 1521 ntBASIC4.51□□□□□ -1.69
SOX3P41225 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SOX3P41225 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX3P41225 AL136520.1-201ENST00000600311 1322 ntBASIC4.51□□□□□ -1.69
SOX3P41225 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.51□□□□□ -1.69
SOX3P41225 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX3P41225 RAD1P1-201ENST00000231383 813 ntBASIC4.51□□□□□ -1.69
SOX3P41225 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX3P41225 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SOX3P41225 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX3P41225 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.51□□□□□ -1.69
SOX3P41225 RNA5SP87-201ENST00000384155 118 ntBASIC4.51□□□□□ -1.69
SOX3P41225 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SOX3P41225 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX3P41225 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.51□□□□□ -1.69
SOX3P41225 QRSL1P2-201ENST00000418582 964 ntBASIC4.51□□□□□ -1.69
SOX3P41225 RPA2P2-201ENST00000419698 796 ntBASIC4.51□□□□□ -1.69
SOX3P41225 OR6C64P-201ENST00000419708 825 ntBASIC4.51□□□□□ -1.69
SOX3P41225 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX3P41225 AC007559.1-201ENST00000428736 355 ntBASIC4.51□□□□□ -1.69
SOX3P41225 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX3P41225 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.51□□□□□ -1.69
SOX3P41225 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.51□□□□□ -1.69
SOX3P41225 AL158053.1-201ENST00000441503 453 ntBASIC4.51□□□□□ -1.69
SOX3P41225 AC010733.1-201ENST00000451515 401 ntBASIC4.51□□□□□ -1.69
SOX3P41225 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX3P41225 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX3P41225 IGLV2-34-201ENST00000490007 283 ntBASIC4.51□□□□□ -1.69
SOX3P41225 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SOX3P41225 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SOX3P41225 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.51□□□□□ -1.69
SOX3P41225 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX3P41225 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.51□□□□□ -1.69
SOX3P41225 RNA5SP392-201ENST00000516905 112 ntBASIC4.51□□□□□ -1.69
SOX3P41225 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX3P41225 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX3P41225 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.51□□□□□ -1.69
SOX3P41225 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX3P41225 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX3P41225 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX3P41225 AC104687.2-201ENST00000604442 342 ntBASIC4.51□□□□□ -1.69
SOX3P41225 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX3P41225 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms