Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MIR4489-201ENST00000578869 62 ntBASIC4.94□□□□□ -1.62
ABCD3P28288 MIR7853-201ENST00000584820 132 ntBASIC4.94□□□□□ -1.62
ABCD3P28288 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.94□□□□□ -1.62
ABCD3P28288 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.94□□□□□ -1.62
ABCD3P28288 AC108738.1-201ENST00000603703 237 ntBASIC4.94□□□□□ -1.62
ABCD3P28288 AC002487.1-201ENST00000604565 994 ntBASIC4.94□□□□□ -1.62
ABCD3P28288 MIR6826-201ENST00000617808 98 ntBASIC4.94□□□□□ -1.62
ABCD3P28288 AC091046.2-201ENST00000620775 665 ntBASIC4.94□□□□□ -1.62
ABCD3P28288 AC015804.1-201ENST00000622935 435 ntBASIC4.94□□□□□ -1.62
ABCD3P28288 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.94□□□□□ -1.62
ABCD3P28288 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.94□□□□□ -1.62
ABCD3P28288 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.94□□□□□ -1.62
ABCD3P28288 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ABCD3P28288 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
ABCD3P28288 SOCS5P3-201ENST00000425115 1576 ntBASIC4.94□□□□□ -1.62
ABCD3P28288 AC114546.3-201ENST00000623582 1734 ntBASIC4.94□□□□□ -1.62
ABCD3P28288 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.94□□□□□ -1.62
ABCD3P28288 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.94□□□□□ -1.62
ABCD3P28288 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 AL022322.2-201ENST00000624072 20397 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
ABCD3P28288 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 AL031595.2-201ENST00000624215 19071 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ABCD3P28288 RNU1-149P-201ENST00000390870 161 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 EI24P3-201ENST00000399046 1062 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
ABCD3P28288 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.93□□□□□ -1.62
ABCD3P28288 RNA5SP296-201ENST00000410523 111 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 RPS7P9-201ENST00000414704 586 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.93□□□□□ -1.62
ABCD3P28288 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 AL009174.1-201ENST00000426577 416 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.93□□□□□ -1.62
ABCD3P28288 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.93□□□□□ -1.62
ABCD3P28288 RPS26P40-201ENST00000435209 294 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AC234064.1-201ENST00000436312 247 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.93□□□□□ -1.62
ABCD3P28288 AC004854.1-201ENST00000440356 349 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 TXNP5-201ENST00000441043 315 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.93□□□□□ -1.62
ABCD3P28288 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.93□□□□□ -1.62
ABCD3P28288 AC018638.3-201ENST00000461273 132 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 RPS4XP12-201ENST00000461747 709 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 RPS26P39-201ENST00000469206 341 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AC104689.1-201ENST00000473356 768 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AC058823.1-201ENST00000485315 474 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.93□□□□□ -1.62
ABCD3P28288 RPSAP51-201ENST00000497462 645 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 AC024558.1-201ENST00000505008 528 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.93□□□□□ -1.62
ABCD3P28288 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.93□□□□□ -1.62
ABCD3P28288 AC008885.2-201ENST00000509506 930 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 HMGN1P9-201ENST00000515212 298 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 SNORA19.3-201ENST00000516165 130 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 SEPT10P1-201ENST00000517342 1162 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AC091163.3-201ENST00000518269 1144 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.93□□□□□ -1.62
ABCD3P28288 OR4A2P-201ENST00000527276 913 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.93□□□□□ -1.62
ABCD3P28288 AC127381.1-201ENST00000555979 939 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.93□□□□□ -1.62
ABCD3P28288 MIR4716-201ENST00000579628 84 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AP001542.2-201ENST00000593141 364 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.93□□□□□ -1.62
ABCD3P28288 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.93□□□□□ -1.62
ABCD3P28288 RPAP2P1-201ENST00000603626 1168 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.93□□□□□ -1.62
ABCD3P28288 AC010632.3-201ENST00000611377 369 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 CYCSP41-201ENST00000616920 296 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AC008115.4-201ENST00000619780 775 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AC104985.3-201ENST00000623479 597 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 AP003400.3-201ENST00000624904 346 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.93□□□□□ -1.62
ABCD3P28288 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.93□□□□□ -1.62
ABCD3P28288 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
ABCD3P28288 OR55B1P-203ENST00000641518 2602 ntBASIC4.93□□□□□ -1.62
ABCD3P28288 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ABCD3P28288 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 AC025263.3-201ENST00000622965 1396 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.92□□□□□ -1.62
ABCD3P28288 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 GVINP1-202ENST00000531871 7271 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms