Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGA1P17096 AC006971.1-201ENST00000407916 4486 ntBASIC4.51□□□□□ -1.69
HMGA1P17096 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGA1P17096 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGA1P17096 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HMGA1P17096 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HMGA1P17096 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMGA1P17096 SNORA57.1-201ENST00000391227 145 ntBASIC4.51□□□□□ -1.69
HMGA1P17096 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGA1P17096 RPS4XP12-201ENST00000461747 709 ntBASIC4.51□□□□□ -1.69
HMGA1P17096 RPS27AP13-201ENST00000498403 237 ntBASIC4.51□□□□□ -1.69
HMGA1P17096 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGA1P17096 AL592156.1-201ENST00000508758 304 ntBASIC4.51□□□□□ -1.69
HMGA1P17096 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGA1P17096 RN7SKP46-201ENST00000515942 234 ntBASIC4.51□□□□□ -1.69
HMGA1P17096 RNA5SP73-201ENST00000516744 108 ntBASIC4.51□□□□□ -1.69
HMGA1P17096 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HMGA1P17096 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGA1P17096 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HMGA1P17096 AC090506.2-201ENST00000624521 419 ntBASIC4.51□□□□□ -1.69
HMGA1P17096 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
HMGA1P17096 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HMGA1P17096 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGA1P17096 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGA1P17096 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGA1P17096 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGA1P17096 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMGA1P17096 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGA1P17096 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGA1P17096 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.5□□□□□ -1.69
HMGA1P17096 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 AL592182.3-201ENST00000642132 3304 ntBASIC4.5□□□□□ -1.69
HMGA1P17096 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGA1P17096 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 RNU1-94P-201ENST00000362627 173 ntBASIC4.5□□□□□ -1.69
HMGA1P17096 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 AL035696.2-201ENST00000407941 709 ntBASIC4.5□□□□□ -1.69
HMGA1P17096 RN7SKP167-201ENST00000411047 285 ntBASIC4.5□□□□□ -1.69
HMGA1P17096 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGA1P17096 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGA1P17096 AL132765.1-201ENST00000434165 553 ntBASIC4.5□□□□□ -1.69
HMGA1P17096 ATP5G1P3-201ENST00000463301 410 ntBASIC4.5□□□□□ -1.69
HMGA1P17096 RPL7P22-201ENST00000466005 733 ntBASIC4.5□□□□□ -1.69
HMGA1P17096 AC112206.1-201ENST00000468416 477 ntBASIC4.5□□□□□ -1.69
HMGA1P17096 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
HMGA1P17096 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGA1P17096 RNU6-513P-201ENST00000516104 104 ntBASIC4.5□□□□□ -1.69
HMGA1P17096 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGA1P17096 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.5□□□□□ -1.69
HMGA1P17096 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGA1P17096 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.5□□□□□ -1.69
HMGA1P17096 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGA1P17096 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGA1P17096 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGA1P17096 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.5□□□□□ -1.69
HMGA1P17096 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGA1P17096 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 CASC19-204ENST00000641001 2055 ntBASIC4.5□□□□□ -1.69
HMGA1P17096 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGA1P17096 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGA1P17096 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HMGA1P17096 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGA1P17096 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGA1P17096 AL133243.3-201ENST00000617415 3004 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGA1P17096 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HMGA1P17096 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGA1P17096 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGA1P17096 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGA1P17096 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGA1P17096 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGA1P17096 AP001157.1-201ENST00000550837 2339 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HMGA1P17096 AC104260.2-201ENST00000623551 3497 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
HMGA1P17096 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HMGA1P17096 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGA1P17096 MIR1271-201ENST00000408537 86 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 VDAC1P9-201ENST00000412766 841 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 OR8G2P-201ENST00000412796 908 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.49□□□□□ -1.69
HMGA1P17096 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGA1P17096 RPL23AP81-201ENST00000455252 467 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGA1P17096 KCTD9P2-201ENST00000512203 1013 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 AC099522.1-202ENST00000514718 367 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HMGA1P17096 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGA1P17096 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.49□□□□□ -1.69
HMGA1P17096 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.49□□□□□ -1.69
HMGA1P17096 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.49□□□□□ -1.69
HMGA1P17096 AL352979.3-201ENST00000553515 247 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms