Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 CCRL1P1-201ENST00000449542 1053 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 GAPDHP14-201ENST00000450472 937 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 RPS17P11-201ENST00000474297 293 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 MRPS33P2-201ENST00000507850 322 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC098976.1-201ENST00000513014 541 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC087373.1-201ENST00000524920 491 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 TVP23CP2-201ENST00000571473 623 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC027455.1-201ENST00000574104 594 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 AP005136.1-201ENST00000579765 429 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 MIR3667-201ENST00000581025 74 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 MIR4270-201ENST00000581799 70 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC096586.1-201ENST00000610267 561 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC092140.2-201ENST00000618027 521 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.94□□□□□ -1.46
HLA-DOAP06340 AC099654.2-201ENST00000433031 1980 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 MFSD8-213ENST00000641134 1327 ntBASIC5.94□□□□□ -1.46
HLA-DOAP06340 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HLA-DOAP06340 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 AL359715.4-201ENST00000606629 1436 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 OR5H2-201ENST00000355273 945 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 SNORA70.10-201ENST00000384515 134 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 CYB5AP4-201ENST00000396692 399 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 MTND2P18-201ENST00000419962 1030 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 USP9YP21-201ENST00000420603 432 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 GLUD1P9-201ENST00000420997 1173 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 BX119904.1-201ENST00000432026 348 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 H2AFZP6-201ENST00000444403 394 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 RPL5P12-201ENST00000477071 851 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 BET1P1-201ENST00000482276 359 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC063949.1-201ENST00000552900 865 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 DUXAP6-201ENST00000553858 601 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 NDUFB4P11-201ENST00000560510 395 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 UBE2FP2-201ENST00000566646 462 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC073387.2-201ENST00000604797 784 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC073137.1-201ENST00000605636 634 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 RMST_5.1-201ENST00000618704 126 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC015722.2-201ENST00000622210 551 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DOAP06340 CCAT2-201ENST00000630920 1752 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HLA-DOAP06340 DDX43P2-201ENST00000604753 1354 ntBASIC5.93□□□□□ -1.46
HLA-DOAP06340 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DOAP06340 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DOAP06340 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DOAP06340 RNU6-1251P-201ENST00000364502 107 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 ATP5HP3-201ENST00000396994 486 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 HMGB3P7-201ENST00000400214 611 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 TAF9BP2-201ENST00000400856 499 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 MIR1302-8-201ENST00000408342 128 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 GPS2P1-201ENST00000411761 986 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 AL158825.1-201ENST00000414735 521 ntBASIC5.92□□□□□ -1.46
HLA-DOAP06340 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DOAP06340 RPS24P7-201ENST00000416921 246 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms