Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
APOBP04114 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 RNA5SP22-201ENST00000365393 109 ntBASIC2.64□□□□□ -1.99
APOBP04114 OR6K3-202ENST00000368146 996 ntBASIC2.64□□□□□ -1.99
APOBP04114 SNORA70.6-201ENST00000383934 134 ntBASIC2.64□□□□□ -1.99
APOBP04114 AL035696.2-201ENST00000407941 709 ntBASIC2.64□□□□□ -1.99
APOBP04114 SNORA74C-2-201ENST00000411179 201 ntBASIC2.64□□□□□ -1.99
APOBP04114 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.64□□□□□ -1.99
APOBP04114 RPS20P4-201ENST00000461659 355 ntBASIC2.64□□□□□ -1.99
APOBP04114 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC2.64□□□□□ -1.99
APOBP04114 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC2.64□□□□□ -1.99
APOBP04114 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC2.64□□□□□ -1.99
APOBP04114 AP001002.2-201ENST00000625137 386 ntBASIC2.64□□□□□ -1.99
APOBP04114 AL360270.2-201ENST00000562952 5985 ntBASIC2.64□□□□□ -1.99
APOBP04114 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC2.64□□□□□ -1.99
APOBP04114 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
APOBP04114 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC2.64□□□□□ -1.99
APOBP04114 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 RNVU1-14-201ENST00000384770 164 ntBASIC2.64□□□□□ -1.99
APOBP04114 AC007066.1-201ENST00000392902 381 ntBASIC2.64□□□□□ -1.99
APOBP04114 Z74021.1-201ENST00000423610 407 ntBASIC2.64□□□□□ -1.99
APOBP04114 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC2.64□□□□□ -1.99
APOBP04114 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC2.64□□□□□ -1.99
APOBP04114 MIR4325-201ENST00000583049 90 ntBASIC2.64□□□□□ -1.99
APOBP04114 AC006065.6-201ENST00000625201 545 ntBASIC2.64□□□□□ -1.99
APOBP04114 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 USP9YP4-201ENST00000424401 1745 ntBASIC2.64□□□□□ -1.99
APOBP04114 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 AL034370.1-201ENST00000397254 1590 ntBASIC2.64□□□□□ -1.99
APOBP04114 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC2.64□□□□□ -1.99
APOBP04114 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 AC079809.1-201ENST00000415468 276 ntBASIC2.64□□□□□ -1.99
APOBP04114 CKS1BP6-201ENST00000424932 240 ntBASIC2.64□□□□□ -1.99
APOBP04114 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.64□□□□□ -1.99
APOBP04114 AC104849.1-201ENST00000462623 405 ntBASIC2.64□□□□□ -1.99
APOBP04114 AC006064.5-201ENST00000541782 248 ntBASIC2.64□□□□□ -1.99
APOBP04114 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC2.64□□□□□ -1.99
APOBP04114 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
APOBP04114 AL354798.1-201ENST00000622505 329 ntBASIC2.64□□□□□ -1.99
APOBP04114 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
APOBP04114 AC116667.1-201ENST00000604855 2072 ntBASIC2.64□□□□□ -1.99
APOBP04114 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 ENSAP1-201ENST00000392855 326 ntBASIC2.63□□□□□ -1.99
APOBP04114 RNU4-6P-201ENST00000410804 122 ntBASIC2.63□□□□□ -1.99
APOBP04114 HSPE1P12-201ENST00000412576 301 ntBASIC2.63□□□□□ -1.99
APOBP04114 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
APOBP04114 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC2.63□□□□□ -1.99
APOBP04114 BTF3P6-201ENST00000448054 499 ntBASIC2.63□□□□□ -1.99
APOBP04114 AC104306.1-201ENST00000449702 371 ntBASIC2.63□□□□□ -1.99
APOBP04114 MTND6P6-201ENST00000478031 263 ntBASIC2.63□□□□□ -1.99
APOBP04114 AC010374.1-201ENST00000503762 1237 ntBASIC2.63□□□□□ -1.99
APOBP04114 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC2.63□□□□□ -1.99
APOBP04114 SRGNP1-201ENST00000603392 451 ntBASIC2.63□□□□□ -1.99
APOBP04114 RNU1-30P-201ENST00000606575 163 ntBASIC2.63□□□□□ -1.99
APOBP04114 OR8G7P-201ENST00000616658 848 ntBASIC2.63□□□□□ -1.99
APOBP04114 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2.63□□□□□ -1.99
APOBP04114 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 DDX18P5-201ENST00000534547 1306 ntBASIC2.63□□□□□ -1.99
APOBP04114 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
APOBP04114 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 AMMECR1LP1-201ENST00000415152 841 ntBASIC2.63□□□□□ -1.99
APOBP04114 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC2.63□□□□□ -1.99
APOBP04114 CYCSP24-201ENST00000445119 316 ntBASIC2.63□□□□□ -1.99
APOBP04114 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC2.63□□□□□ -1.99
APOBP04114 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 AL672167.1-203ENST00000641299 2975 ntBASIC2.63□□□□□ -1.99
APOBP04114 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC2.63□□□□□ -1.99
APOBP04114 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.63□□□□□ -1.99
APOBP04114 PRDX3P3-201ENST00000447765 522 ntBASIC2.63□□□□□ -1.99
APOBP04114 RPS29P2-201ENST00000479278 136 ntBASIC2.63□□□□□ -1.99
APOBP04114 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.63□□□□□ -1.99
APOBP04114 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC2.63□□□□□ -1.99
APOBP04114 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC2.63□□□□□ -1.99
APOBP04114 AL606490.9-201ENST00000603331 271 ntBASIC2.63□□□□□ -1.99
APOBP04114 AC011816.2-201ENST00000607089 556 ntBASIC2.63□□□□□ -1.99
APOBP04114 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
APOBP04114 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
APOBP04114 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms