Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFBP01127 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFBP01127 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFBP01127 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
PDGFBP01127 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.91□□□□□ -1.62
PDGFBP01127 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFBP01127 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFBP01127 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFBP01127 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
PDGFBP01127 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFBP01127 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
PDGFBP01127 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFBP01127 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFBP01127 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFBP01127 AP000756.2-201ENST00000624168 2567 ntBASIC4.9□□□□□ -1.62
PDGFBP01127 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.9□□□□□ -1.62
PDGFBP01127 AC009313.2-201ENST00000417893 1941 ntBASIC4.9□□□□□ -1.62
PDGFBP01127 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFBP01127 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFBP01127 AC007382.1-201ENST00000624376 2618 ntBASIC4.9□□□□□ -1.62
PDGFBP01127 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PDGFBP01127 RNU1-94P-201ENST00000362627 173 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 RNA5SP223-201ENST00000365174 120 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.9□□□□□ -1.63
PDGFBP01127 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PDGFBP01127 RNA5SP44-201ENST00000410446 133 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 RPL26P37-201ENST00000411983 438 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 NRBF2P2-201ENST00000413087 861 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 AC017019.1-201ENST00000426129 261 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFBP01127 NDUFA5P1-201ENST00000433858 341 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFBP01127 AL157827.1-201ENST00000447622 132 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 AL627224.1-201ENST00000448334 444 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 TAAR4P-201ENST00000454843 1039 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFBP01127 AC104971.1-201ENST00000495117 578 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 AP002812.1-201ENST00000495378 474 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 AC091868.1-201ENST00000508746 304 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.9□□□□□ -1.63
PDGFBP01127 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFBP01127 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFBP01127 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFBP01127 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFBP01127 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.9□□□□□ -1.63
PDGFBP01127 MIR4444-1-201ENST00000581696 74 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 MIR4444-2-201ENST00000584390 74 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFBP01127 TMEM30CP-203ENST00000637814 1035 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 AC119674.1-212ENST00000641155 993 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.9□□□□□ -1.63
PDGFBP01127 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFBP01127 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
PDGFBP01127 AC138907.8-201ENST00000623981 2256 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.9□□□□□ -1.63
PDGFBP01127 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.9□□□□□ -1.63
PDGFBP01127 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.9□□□□□ -1.63
PDGFBP01127 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
PDGFBP01127 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFBP01127 PHKBP1-201ENST00000450951 1951 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 AC083899.1-201ENST00000454465 3819 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFBP01127 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDGFBP01127 AC090017.1-201ENST00000548612 1779 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFBP01127 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDGFBP01127 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFBP01127 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PDGFBP01127 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFBP01127 AC092681.1-201ENST00000297369 291 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFBP01127 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFBP01127 AC093719.1-202ENST00000392735 373 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.89□□□□□ -1.63
PDGFBP01127 AL390316.1-201ENST00000406279 553 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 AC099336.2-201ENST00000422457 254 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.89□□□□□ -1.63
PDGFBP01127 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFBP01127 MTCYBP12-201ENST00000440559 1134 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 Z99127.2-201ENST00000441426 334 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFBP01127 MRPL35P2-201ENST00000448009 511 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 AC000111.2-201ENST00000448200 210 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFBP01127 AC099560.2-201ENST00000457554 255 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 RN7SL542P-201ENST00000467147 294 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 RN7SL303P-201ENST00000469773 251 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 RFPL4AP5-201ENST00000514977 504 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 MTCO1P49-201ENST00000523429 802 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFBP01127 AC084824.2-201ENST00000548906 345 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 AL049839.1-201ENST00000556151 657 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 AC067805.1-201ENST00000559344 470 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.89□□□□□ -1.63
PDGFBP01127 AC024220.1-201ENST00000603675 484 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 BX322635.1-201ENST00000605804 496 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 AC135803.1-201ENST00000608748 565 ntBASIC4.89□□□□□ -1.63
PDGFBP01127 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFBP01127 BX005214.3-202ENST00000619809 325 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms