Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.58□□□□□ -1.68
PRKNO60260 AC118942.1-201ENST00000529674 1035 ntBASIC4.58□□□□□ -1.68
PRKNO60260 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.58□□□□□ -1.68
PRKNO60260 MIR4480-201ENST00000582492 71 ntBASIC4.58□□□□□ -1.68
PRKNO60260 AC112220.2-201ENST00000605513 533 ntBASIC4.58□□□□□ -1.68
PRKNO60260 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.58□□□□□ -1.68
PRKNO60260 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.58□□□□□ -1.68
PRKNO60260 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 AC099654.2-201ENST00000433031 1980 ntBASIC4.58□□□□□ -1.68
PRKNO60260 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRKNO60260 MUC2-202ENST00000613187 4845 ntBASIC4.58□□□□□ -1.68
PRKNO60260 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.58□□□□□ -1.68
PRKNO60260 MTND5P11-201ENST00000511037 1812 ntBASIC4.58□□□□□ -1.68
PRKNO60260 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PRKNO60260 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PRKNO60260 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.57□□□□□ -1.68
PRKNO60260 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.57□□□□□ -1.68
PRKNO60260 SAMMSON-226ENST00000642089 1582 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.57□□□□□ -1.68
PRKNO60260 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRKNO60260 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRKNO60260 AC073429.2-201ENST00000569694 1444 ntBASIC4.57□□□□□ -1.68
PRKNO60260 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
PRKNO60260 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRKNO60260 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.57□□□□□ -1.68
PRKNO60260 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PRKNO60260 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PRKNO60260 RNA5SP105-201ENST00000391123 113 ntBASIC4.57□□□□□ -1.68
PRKNO60260 HMGB3P7-201ENST00000400214 611 ntBASIC4.57□□□□□ -1.68
PRKNO60260 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRKNO60260 AL133270.1-201ENST00000402635 279 ntBASIC4.57□□□□□ -1.68
PRKNO60260 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.57□□□□□ -1.68
PRKNO60260 AL360081.1-201ENST00000428299 555 ntBASIC4.57□□□□□ -1.68
PRKNO60260 OR2B7P-201ENST00000429302 934 ntBASIC4.57□□□□□ -1.68
PRKNO60260 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.57□□□□□ -1.68
PRKNO60260 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.57□□□□□ -1.68
PRKNO60260 AC008072.1-201ENST00000434254 824 ntBASIC4.57□□□□□ -1.68
PRKNO60260 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.57□□□□□ -1.68
PRKNO60260 MED6P1-201ENST00000439659 713 ntBASIC4.57□□□□□ -1.68
PRKNO60260 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.57□□□□□ -1.68
PRKNO60260 RPS27P5-201ENST00000444247 244 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.57□□□□□ -1.68
PRKNO60260 AL157827.1-201ENST00000447622 132 ntBASIC4.57□□□□□ -1.68
PRKNO60260 OR52J1P-201ENST00000450596 932 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.57□□□□□ -1.68
PRKNO60260 AC093166.2-201ENST00000455969 1017 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC063943.1-201ENST00000465434 453 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.57□□□□□ -1.68
PRKNO60260 RPL21P47-201ENST00000483696 477 ntBASIC4.57□□□□□ -1.68
PRKNO60260 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.57□□□□□ -1.68
PRKNO60260 AC008427.1-201ENST00000503102 655 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.57□□□□□ -1.68
PRKNO60260 ENPP7P11-201ENST00000505915 627 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC114322.1-201ENST00000506771 926 ntBASIC4.57□□□□□ -1.68
PRKNO60260 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.57□□□□□ -1.68
PRKNO60260 AC034205.1-201ENST00000520621 638 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC010376.1-201ENST00000522101 334 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.57□□□□□ -1.68
PRKNO60260 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.57□□□□□ -1.68
PRKNO60260 AP000916.1-201ENST00000533869 835 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AL358913.1-201ENST00000554342 121 ntBASIC4.57□□□□□ -1.68
PRKNO60260 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PRKNO60260 MIR4509-3-201ENST00000578671 94 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC124283.4-201ENST00000581815 456 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.57□□□□□ -1.68
PRKNO60260 MIR4509-2-201ENST00000583920 94 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.57□□□□□ -1.68
PRKNO60260 AC068020.1-201ENST00000594215 661 ntBASIC4.57□□□□□ -1.68
PRKNO60260 CLIC4P2-201ENST00000601934 717 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC130352.1-201ENST00000602979 661 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC020910.3-201ENST00000603701 874 ntBASIC4.57□□□□□ -1.68
PRKNO60260 SUMO2P14-201ENST00000604488 293 ntBASIC4.57□□□□□ -1.68
PRKNO60260 OR7A19P-201ENST00000608051 733 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC245100.7-201ENST00000609678 442 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC006946.3-201ENST00000609791 756 ntBASIC4.57□□□□□ -1.68
PRKNO60260 AC100827.5-201ENST00000615883 426 ntBASIC4.57□□□□□ -1.68
PRKNO60260 MIR4509-1-201ENST00000618224 94 ntBASIC4.57□□□□□ -1.68
PRKNO60260 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.57□□□□□ -1.68
PRKNO60260 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.57□□□□□ -1.68
PRKNO60260 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.57□□□□□ -1.68
PRKNO60260 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.57□□□□□ -1.68
PRKNO60260 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.57□□□□□ -1.68
PRKNO60260 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PRKNO60260 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.57□□□□□ -1.68
PRKNO60260 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.57□□□□□ -1.68
PRKNO60260 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRKNO60260 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
PRKNO60260 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.57□□□□□ -1.68
PRKNO60260 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
PRKNO60260 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms