Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CUX2O14529 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.73□□□□□ -1.17
CUX2O14529 AL139095.3-201ENST00000419672 1203 ntBASIC7.73□□□□□ -1.17
CUX2O14529 AC092162.1-201ENST00000432828 434 ntBASIC7.73□□□□□ -1.17
CUX2O14529 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
CUX2O14529 AL133244.1-201ENST00000456007 258 ntBASIC7.73□□□□□ -1.17
CUX2O14529 RNA5SP230-201ENST00000517039 122 ntBASIC7.73□□□□□ -1.17
CUX2O14529 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC7.73□□□□□ -1.17
CUX2O14529 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
CUX2O14529 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CUX2O14529 AC116096.1-201ENST00000566804 2314 ntBASIC7.73□□□□□ -1.17
CUX2O14529 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC7.73□□□□□ -1.17
CUX2O14529 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CUX2O14529 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CUX2O14529 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUX2O14529 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUX2O14529 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CUX2O14529 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CUX2O14529 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUX2O14529 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUX2O14529 AC083843.3-201ENST00000623679 2186 ntBASIC7.72□□□□□ -1.17
CUX2O14529 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
CUX2O14529 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
CUX2O14529 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUX2O14529 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUX2O14529 AL590806.1-201ENST00000415818 853 ntBASIC7.72□□□□□ -1.17
CUX2O14529 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.72□□□□□ -1.17
CUX2O14529 AL591363.1-201ENST00000450091 483 ntBASIC7.72□□□□□ -1.17
CUX2O14529 ACTR3P3-201ENST00000480448 893 ntBASIC7.72□□□□□ -1.17
CUX2O14529 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC7.72□□□□□ -1.17
CUX2O14529 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC7.72□□□□□ -1.17
CUX2O14529 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.72□□□□□ -1.17
CUX2O14529 AC006453.5-201ENST00000636451 619 ntBASIC7.72□□□□□ -1.17
CUX2O14529 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUX2O14529 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
CUX2O14529 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CUX2O14529 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.71□□□□□ -1.18
CUX2O14529 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.71□□□□□ -1.18
CUX2O14529 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CUX2O14529 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC7.71□□□□□ -1.18
CUX2O14529 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC7.71□□□□□ -1.18
CUX2O14529 PDSS1P2-201ENST00000449397 678 ntBASIC7.71□□□□□ -1.18
CUX2O14529 SETP6-201ENST00000479329 568 ntBASIC7.71□□□□□ -1.18
CUX2O14529 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.71□□□□□ -1.18
CUX2O14529 RN7SKP289-201ENST00000517244 295 ntBASIC7.71□□□□□ -1.18
CUX2O14529 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CUX2O14529 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CUX2O14529 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.71□□□□□ -1.18
CUX2O14529 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CUX2O14529 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CUX2O14529 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC7.71□□□□□ -1.18
CUX2O14529 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CUX2O14529 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
CUX2O14529 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CUX2O14529 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC7.7□□□□□ -1.18
CUX2O14529 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CUX2O14529 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.7□□□□□ -1.18
CUX2O14529 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CUX2O14529 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC7.7□□□□□ -1.18
CUX2O14529 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.7□□□□□ -1.18
CUX2O14529 RPS29P2-201ENST00000479278 136 ntBASIC7.7□□□□□ -1.18
CUX2O14529 AC069304.1-201ENST00000491593 704 ntBASIC7.7□□□□□ -1.18
CUX2O14529 PCNP-208ENST00000627393 136 ntTSL 2 BASIC7.7□□□□□ -1.18
CUX2O14529 U6.105-201ENST00000637379 88 ntBASIC7.7□□□□□ -1.18
CUX2O14529 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CUX2O14529 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CUX2O14529 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
CUX2O14529 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.7□□□□□ -1.18
CUX2O14529 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUX2O14529 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CUX2O14529 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
CUX2O14529 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CUX2O14529 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC7.69□□□□□ -1.18
CUX2O14529 RPL23AP52-201ENST00000439311 478 ntBASIC7.69□□□□□ -1.18
CUX2O14529 PRDX3P3-201ENST00000447765 522 ntBASIC7.69□□□□□ -1.18
CUX2O14529 UBE2DNL-203ENST00000474922 222 ntBASIC7.69□□□□□ -1.18
CUX2O14529 AC074250.1-201ENST00000511117 192 ntBASIC7.69□□□□□ -1.18
CUX2O14529 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.69□□□□□ -1.18
CUX2O14529 AL161729.3-201ENST00000603533 673 ntBASIC7.69□□□□□ -1.18
CUX2O14529 AC006065.6-201ENST00000625201 545 ntBASIC7.69□□□□□ -1.18
CUX2O14529 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUX2O14529 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUX2O14529 AP000473.2-201ENST00000602659 1537 ntBASIC7.69□□□□□ -1.18
CUX2O14529 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUX2O14529 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CUX2O14529 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.69□□□□□ -1.18
CUX2O14529 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUX2O14529 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CUX2O14529 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
CUX2O14529 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CUX2O14529 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC7.68□□□□□ -1.18
CUX2O14529 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.68□□□□□ -1.18
CUX2O14529 AC090142.1-201ENST00000465776 462 ntBASIC7.68□□□□□ -1.18
CUX2O14529 AL049873.1-201ENST00000480540 376 ntBASIC7.68□□□□□ -1.18
CUX2O14529 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC7.68□□□□□ -1.18
CUX2O14529 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC7.68□□□□□ -1.18
CUX2O14529 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CUX2O14529 AL031119.1-201ENST00000404707 1879 ntBASIC7.68□□□□□ -1.18
CUX2O14529 MED23-203ENST00000368058 4576 ntTSL 5 BASIC7.68□□□□□ -1.18
CUX2O14529 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms