Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MAPK10-286ENST00000641208 8747 ntBASIC5.07□□□□□ -1.6
O00370 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
O00370 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
O00370 IL6STP1-201ENST00000346911 1020 ntBASIC5.07□□□□□ -1.6
O00370 RNA5SP87-201ENST00000384155 118 ntBASIC5.07□□□□□ -1.6
O00370 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
O00370 AL034374.1-201ENST00000406329 351 ntBASIC5.07□□□□□ -1.6
O00370 RSU1P3-201ENST00000412878 835 ntBASIC5.07□□□□□ -1.6
O00370 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.07□□□□□ -1.6
O00370 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.07□□□□□ -1.6
O00370 E2F6P2-201ENST00000420708 748 ntBASIC5.07□□□□□ -1.6
O00370 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.07□□□□□ -1.6
O00370 CYCSP11-201ENST00000436426 315 ntBASIC5.07□□□□□ -1.6
O00370 OR1H1P-201ENST00000448731 937 ntBASIC5.07□□□□□ -1.6
O00370 CCRL1P1-201ENST00000449542 1053 ntBASIC5.07□□□□□ -1.6
O00370 AC092324.1-201ENST00000468671 324 ntBASIC5.07□□□□□ -1.6
O00370 AC096741.1-201ENST00000472250 846 ntBASIC5.07□□□□□ -1.6
O00370 IGLV2-34-201ENST00000490007 283 ntBASIC5.07□□□□□ -1.6
O00370 AC105233.1-201ENST00000498840 781 ntBASIC5.07□□□□□ -1.6
O00370 AC093890.1-201ENST00000502554 540 ntBASIC5.07□□□□□ -1.6
O00370 AC091868.1-201ENST00000508746 304 ntBASIC5.07□□□□□ -1.6
O00370 AC021146.3-201ENST00000511911 260 ntBASIC5.07□□□□□ -1.6
O00370 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.07□□□□□ -1.6
O00370 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.07□□□□□ -1.6
O00370 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.07□□□□□ -1.6
O00370 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.07□□□□□ -1.6
O00370 FKBP1BP1-201ENST00000553366 325 ntBASIC5.07□□□□□ -1.6
O00370 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
O00370 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.07□□□□□ -1.6
O00370 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.07□□□□□ -1.6
O00370 AL512782.1-201ENST00000603093 364 ntBASIC5.07□□□□□ -1.6
O00370 AC084373.1-201ENST00000603311 235 ntBASIC5.07□□□□□ -1.6
O00370 AL391358.1-201ENST00000605342 190 ntBASIC5.07□□□□□ -1.6
O00370 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.07□□□□□ -1.6
O00370 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.07□□□□□ -1.6
O00370 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
O00370 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
O00370 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
O00370 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.07□□□□□ -1.6
O00370 AC107068.1-201ENST00000563286 4218 ntBASIC5.06□□□□□ -1.6
O00370 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
O00370 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.06□□□□□ -1.6
O00370 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
O00370 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.06□□□□□ -1.6
O00370 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
O00370 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
O00370 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
O00370 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
O00370 RNU6-1251P-201ENST00000364502 107 ntBASIC5.06□□□□□ -1.6
O00370 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
O00370 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
O00370 MT-TP-201ENST00000387461 68 ntBASIC5.06□□□□□ -1.6
O00370 SNORD65-201ENST00000391079 73 ntBASIC5.06□□□□□ -1.6
O00370 AL592291.1-201ENST00000403830 352 ntBASIC5.06□□□□□ -1.6
O00370 AMZ2P2-201ENST00000406819 1057 ntBASIC5.06□□□□□ -1.6
O00370 RNU2-50P-201ENST00000410494 143 ntBASIC5.06□□□□□ -1.6
O00370 RNU2-72P-201ENST00000411175 163 ntBASIC5.06□□□□□ -1.6
O00370 OR51B3P-201ENST00000412287 913 ntBASIC5.06□□□□□ -1.6
O00370 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
O00370 AL358176.3-201ENST00000420757 454 ntBASIC5.06□□□□□ -1.6
O00370 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.06□□□□□ -1.6
O00370 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.06□□□□□ -1.6
O00370 NRBF2P3-201ENST00000432731 865 ntBASIC5.06□□□□□ -1.6
O00370 AC008072.1-201ENST00000434254 824 ntBASIC5.06□□□□□ -1.6
O00370 MRPS33P4-201ENST00000434892 317 ntBASIC5.06□□□□□ -1.6
O00370 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.06□□□□□ -1.6
O00370 CACYBPP1-201ENST00000438592 684 ntBASIC5.06□□□□□ -1.6
O00370 ARL5AP3-201ENST00000439327 386 ntBASIC5.06□□□□□ -1.6
O00370 RPS26P2-201ENST00000440331 348 ntBASIC5.06□□□□□ -1.6
O00370 AC073648.4-201ENST00000442655 781 ntBASIC5.06□□□□□ -1.6
O00370 TDGF1P1-201ENST00000445734 527 ntBASIC5.06□□□□□ -1.6
O00370 PTMAP3-201ENST00000447474 330 ntBASIC5.06□□□□□ -1.6
O00370 RPL7L1P1-201ENST00000448259 785 ntBASIC5.06□□□□□ -1.6
O00370 MTND2P25-201ENST00000449028 610 ntBASIC5.06□□□□□ -1.6
O00370 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.06□□□□□ -1.6
O00370 AC091685.2-201ENST00000454924 864 ntBASIC5.06□□□□□ -1.6
O00370 RPL35AP28-201ENST00000459730 331 ntBASIC5.06□□□□□ -1.6
O00370 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.06□□□□□ -1.6
O00370 DEFB109F-201ENST00000491870 277 ntBASIC5.06□□□□□ -1.6
O00370 AC231760.1-201ENST00000498002 260 ntBASIC5.06□□□□□ -1.6
O00370 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.06□□□□□ -1.6
O00370 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.06□□□□□ -1.6
O00370 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.06□□□□□ -1.6
O00370 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.06□□□□□ -1.6
O00370 AC092868.3-201ENST00000560515 784 ntBASIC5.06□□□□□ -1.6
O00370 UBE2FP2-201ENST00000566646 462 ntBASIC5.06□□□□□ -1.6
O00370 AL049539.1-201ENST00000611964 459 ntBASIC5.06□□□□□ -1.6
O00370 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.06□□□□□ -1.6
O00370 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
O00370 AC009032.1-201ENST00000617574 431 ntBASIC5.06□□□□□ -1.6
O00370 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
O00370 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
O00370 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
O00370 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
O00370 AC007382.1-201ENST00000624376 2618 ntBASIC5.06□□□□□ -1.6
O00370 AL450326.2-201ENST00000421913 1962 ntBASIC5.05□□□□□ -1.6
O00370 AL442639.1-201ENST00000625030 1899 ntBASIC5.05□□□□□ -1.6
O00370 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
O00370 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
O00370 SDAD1P1-202ENST00000524156 2051 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms