Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AP005131.7-201ENST00000610087 611 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 CYP4F35P-202ENST00000636121 390 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 AC091152.2-201ENST00000591628 2569 ntBASIC2.42□□□□□ -2.02
CHKB-CPT1BH3BT56 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC024560.2-201ENST00000507981 1497 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC138915.3-201ENST00000562908 1389 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC008758.3-201ENST00000507003 1829 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RNFT1P3-201ENST00000340898 1052 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AL136116.2-201ENST00000404020 785 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RNU2-37P-201ENST00000410695 177 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AL354890.1-201ENST00000413730 346 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RPL30P2-201ENST00000414021 291 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC127526.1-201ENST00000417526 366 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RPL21P43-201ENST00000425440 472 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 SUMO2P3-201ENST00000438311 288 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 ATP6V1E1P1-201ENST00000439215 681 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 TPTE2P3-201ENST00000441562 1189 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RPL31P11-202ENST00000454082 372 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 MTCO3P20-201ENST00000454926 688 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RN7SL393P-201ENST00000463588 296 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC023194.2-201ENST00000465398 406 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RN7SL585P-201ENST00000470538 280 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 MTND6P6-201ENST00000478031 263 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC116562.1-201ENST00000485355 781 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC104164.2-201ENST00000496953 495 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC105391.1-201ENST00000503155 1045 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 HMGN1P17-201ENST00000513734 295 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 CETN3-206ENST00000522864 738 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC106785.3-201ENST00000564064 847 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 ZNF192P1-203ENST00000565888 810 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC027796.1-201ENST00000575593 512 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AP001496.3-201ENST00000580230 913 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR4701-201ENST00000583094 63 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC015802.2-201ENST00000589690 189 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR432-201ENST00000606207 94 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC092266.1-201ENST00000610958 165 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AL450489.1-201ENST00000612071 468 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC092628.2-201ENST00000622492 339 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC132068.1-201ENST00000623805 459 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 BDP1P-201ENST00000582658 1990 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 AC005183.1-201ENST00000603687 1979 ntBASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC2.41□□□□□ -2.02
CHKB-CPT1BH3BT56 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.4□□□□□ -2.02
CHKB-CPT1BH3BT56 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC2.4□□□□□ -2.02
CHKB-CPT1BH3BT56 AC092326.2-201ENST00000624772 1561 ntBASIC2.4□□□□□ -2.02
CHKB-CPT1BH3BT56 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
CHKB-CPT1BH3BT56 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CHKB-CPT1BH3BT56 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CHKB-CPT1BH3BT56 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CHKB-CPT1BH3BT56 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CHKB-CPT1BH3BT56 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms