Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 PA2G4P6-201ENST00000438325 1197 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AL162388.1-201ENST00000450912 352 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC100832.1-201ENST00000471945 383 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 RPL7P39-201ENST00000481157 744 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 EIF1P7-201ENST00000487533 337 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 RPS26P15-201ENST00000488067 348 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC010627.1-201ENST00000503819 1294 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 RNA5SP362-201ENST00000516048 118 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC020978.7-201ENST00000575953 1187 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 MIR1273E-201ENST00000581165 102 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC010424.2-201ENST00000607594 443 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AP000894.4-201ENST00000610185 483 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AL022401.1-201ENST00000619498 108 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC145207.9-201ENST00000623802 325 ntBASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RBFOX3A6NFN3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RBFOX3A6NFN3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RBFOX3A6NFN3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
RBFOX3A6NFN3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RBFOX3A6NFN3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
RBFOX3A6NFN3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
RBFOX3A6NFN3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
RBFOX3A6NFN3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
RBFOX3A6NFN3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 CYP1D1P-201ENST00000416662 1433 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 RNA5SP428-201ENST00000365129 132 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 U3.25-201ENST00000391209 220 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 HSPD1P16-201ENST00000402302 394 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AL078604.1-201ENST00000404609 466 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 RN7SKP229-201ENST00000410465 302 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 JKAMPP1-201ENST00000413804 919 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC007064.3-201ENST00000422608 359 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 OR7E125P-201ENST00000443450 846 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 SPRYD7P1-201ENST00000443861 570 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AP000281.1-201ENST00000444036 316 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AL157884.3-201ENST00000448273 1184 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AL356390.1-201ENST00000455684 397 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AL133477.1-201ENST00000457472 514 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 STRADBP1-201ENST00000478954 1281 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 ASB8-215ENST00000540782 659 ntTSL 3 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 NMNAT1P1-201ENST00000554095 876 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC090515.3-201ENST00000560431 315 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AP005901.4-201ENST00000577336 569 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC008536.1-201ENST00000602872 669 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AL121932.1-201ENST00000605542 214 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AP000864.1-201ENST00000609424 650 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC109309.2-201ENST00000612597 332 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC026368.1-201ENST00000614934 690 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AL590410.1-201ENST00000617925 333 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 AL133370.2-201ENST00000619934 439 ntBASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RBFOX3A6NFN3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms