Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 RIMKLBP2-201ENST00000424737 654 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 DPRXP1-201ENST00000426312 460 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AL031736.2-201ENST00000426573 787 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 NPM1P18-201ENST00000434232 732 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 SPRYD7P1-201ENST00000443861 570 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 HMGB1P16-201ENST00000447155 540 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC007327.1-201ENST00000447461 264 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 RPS27AP15-201ENST00000447672 466 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AL133445.1-201ENST00000467051 452 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC074386.1-201ENST00000476560 767 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SL177P-201ENST00000476596 299 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC090114.3-201ENST00000479267 829 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 SERPINE4P-201ENST00000554978 281 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC090695.1-201ENST00000561269 1222 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 MIR3912-201ENST00000577566 105 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AL392112.1-201ENST00000605115 829 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC010245.2-201ENST00000606908 1167 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AL162574.1-201ENST00000615702 950 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 MIR8080-201ENST00000622224 89 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 RNU4-28P-201ENST00000364739 141 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 RNU6-1151P-201ENST00000384684 107 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 MIR551A-201ENST00000385042 96 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 TAS2R15P-201ENST00000390674 928 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 FCF1P5-201ENST00000406490 482 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 RPL31P52-201ENST00000407532 367 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AL590609.2-201ENST00000421430 368 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AC007161.1-204ENST00000423039 460 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 OR6D1P-201ENST00000436165 939 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AC004865.1-201ENST00000442276 1003 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AC023271.1-201ENST00000445936 1090 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SL188P-201ENST00000469842 285 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 MTND6P6-201ENST00000478031 263 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 VPS26AP1-201ENST00000483197 979 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SL214P-201ENST00000487317 265 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 BX510359.5-201ENST00000515651 304 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AC023813.2-201ENST00000564321 469 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AC015688.2-201ENST00000584523 262 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AL118522.2-201ENST00000616045 615 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AC011330.2-201ENST00000621680 635 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AC015908.5-201ENST00000623289 343 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AC083899.1-201ENST00000454465 3819 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 AC006206.1-201ENST00000544842 3387 ntBASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A3BPQ9Y5P4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 AC144833.1-201ENST00000567953 4089 ntBASIC6.16□□□□□ -1.42
COL4A3BPQ9Y5P4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms