Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 Y_RNA.384-201ENST00000383909 102 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU6-730P-201ENST00000383954 104 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU6-729P-201ENST00000384399 107 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 MIR152-201ENST00000385212 87 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 RPL7P58-201ENST00000402913 758 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AL162578.1-201ENST00000406202 378 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AL356967.1-201ENST00000406305 431 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 RN7SKP254-201ENST00000410685 310 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU6-1068P-201ENST00000410958 103 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AP000534.2-201ENST00000412729 568 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 TPMTP2-201ENST00000414372 726 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 GAPDHP57-201ENST00000424400 585 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AL353777.1-201ENST00000425552 326 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC006335.2-201ENST00000437993 330 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AL139135.2-201ENST00000445040 433 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 SDHCP3-201ENST00000445371 506 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 BX323845.2-201ENST00000458382 234 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC104563.1-201ENST00000476147 376 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC079594.1-201ENST00000489757 331 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC108471.1-201ENST00000513977 287 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 RNA5SP401-201ENST00000515920 127 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU6-277P-201ENST00000516272 106 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU6-714P-201ENST00000516963 103 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC139493.1-201ENST00000604368 397 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC121334.2-201ENST00000605387 271 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AL513218.1-201ENST00000606527 391 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC090948.1-201ENST00000607464 549 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 OR10AB1P-201ENST00000609613 938 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 AC008121.3-201ENST00000618726 433 ntBASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHGA11Q9Y5H2 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 USP9YP4-201ENST00000424401 1745 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 Y_RNA.381-201ENST00000365666 102 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU6-444P-201ENST00000383988 108 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 U3.23-201ENST00000391132 200 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC090114.1-201ENST00000393266 448 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 RAB28P1-201ENST00000411517 641 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 SLC35E1P1-201ENST00000419313 864 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 RPSAP1-201ENST00000421328 880 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AL353678.1-201ENST00000422735 741 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 DUTP4-201ENST00000424782 475 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC010881.1-201ENST00000433830 235 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 TUBB4BP6-201ENST00000437576 479 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC011742.2-201ENST00000443818 352 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC073594.1-201ENST00000462065 364 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC079944.1-201ENST00000485426 495 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC034222.1-201ENST00000494052 532 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 TMEM251P1-201ENST00000503717 318 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC103851.1-201ENST00000506833 274 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms