Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AC007016.1-201ENST00000512110 244 ntBASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AP002981.1-201ENST00000517692 975 ntBASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 HMGB1P23-201ENST00000518743 568 ntBASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AC090181.2-201ENST00000602975 672 ntBASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AC026979.4-201ENST00000606555 645 ntBASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AL392048.1-201ENST00000613946 534 ntBASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 U3.53-201ENST00000628922 216 ntBASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 AC100871.1-201ENST00000507871 1456 ntBASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPF3BQ9BZI7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 RNA5SP479-201ENST00000364858 117 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 PPIAP21-201ENST00000464473 501 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 RN7SL604P-201ENST00000492589 296 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 MTND4LP2-201ENST00000502312 285 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 RN7SKP122-201ENST00000515923 296 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 RPL21P7-201ENST00000557463 483 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 AC023762.1-201ENST00000603280 584 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 AC103792.1-201ENST00000603591 919 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 AC008966.2-201ENST00000606157 453 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 MIR6830-201ENST00000636015 70 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 CDC27P2-201ENST00000425026 1922 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 AL513548.1-201ENST00000562904 1724 ntBASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UPF3BQ9BZI7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 MIR23B-201ENST00000384832 97 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 MIR659-201ENST00000384963 97 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 RNA5SP332-201ENST00000391063 115 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AL359265.2-201ENST00000434367 631 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AC021146.3-201ENST00000511911 260 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 LDHBP3-201ENST00000514909 822 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 RN7SKP21-201ENST00000516503 220 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 ADAD1P2-201ENST00000588476 646 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 CCDC58P3-201ENST00000590792 430 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 RPL7P50-201ENST00000600588 727 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AC091979.2-201ENST00000607514 214 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AP002360.3-201ENST00000607673 710 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AL445423.1-201ENST00000609941 536 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AL353726.1-201ENST00000614041 1000 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 KARSP3-201ENST00000571212 1504 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AP001273.1-201ENST00000624493 3152 ntBASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.41□□□□□ -1.54
UPF3BQ9BZI7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms