Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 AC104763.1-201ENST00000475274 360 ntBASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 AC098799.3-201ENST00000506095 438 ntBASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 AC093824.1-201ENST00000508796 343 ntBASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 COX6CP4-201ENST00000605798 228 ntBASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 AL035461.2-201ENST00000619201 524 ntBASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RPAP1Q9BWH6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 UGT2B26P-201ENST00000508672 1613 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 AC005005.4-201ENST00000623789 16698 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 MAPK10-349ENST00000641767 3661 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 RNU1-20P-201ENST00000363314 162 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 RNA5SP151-201ENST00000365632 117 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 SMC4P1-201ENST00000414479 527 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 AL356387.2-201ENST00000422272 243 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 AC004448.2-201ENST00000422360 586 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 ISCUP1-201ENST00000454451 448 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 ATP5G1P3-201ENST00000463301 410 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 RN7SL41P-201ENST00000476144 297 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 AC021146.3-201ENST00000511911 260 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 RNA5SP446-201ENST00000515955 82 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 AC005520.3-201ENST00000602874 370 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 AC010857.1-201ENST00000606398 594 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 MFSD8-220ENST00000641243 1422 ntBASIC5.53□□□□□ -1.52
RPAP1Q9BWH6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 AC093591.2-201ENST00000565254 3843 ntBASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 AL136164.3-201ENST00000624429 3978 ntBASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 BTBD10P1-201ENST00000549824 1352 ntBASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 RNU6-249P-201ENST00000363016 102 ntBASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 OR6C69P-201ENST00000394268 893 ntBASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 AL050305.1-201ENST00000399993 1230 ntBASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 FHP1-201ENST00000442741 703 ntBASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 AC107068.1-201ENST00000563286 4218 ntBASIC5.52□□□□□ -1.53
RPAP1Q9BWH6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 DDX18P4-201ENST00000511690 1966 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 AC017104.4-201ENST00000636283 1592 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 AC105074.1-201ENST00000623380 3095 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 OR56B2P-201ENST00000317102 954 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 MIR195-201ENST00000385194 87 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 OR1F12-201ENST00000402365 945 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 AC010618.1-201ENST00000469924 477 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 RNU6-1334P-201ENST00000516032 105 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 AP000827.1-201ENST00000527814 258 ntBASIC5.51□□□□□ -1.53
RPAP1Q9BWH6 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms