Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 TBCA-207ENST00000520039 157 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 MTCYBP20-201ENST00000524239 1129 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 BCAS2P1-201ENST00000528022 632 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.72□□□□□ -1.81
LITAFQ99732 AL121766.1-201ENST00000547436 487 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC006349.1-201ENST00000555526 235 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 NPM1P47-201ENST00000560843 856 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC016839.1-201ENST00000578162 867 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 BPTFP1-201ENST00000579209 492 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC012254.3-201ENST00000591183 2117 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AF131215.7-201ENST00000602443 707 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC068790.6-201ENST00000602558 258 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 RN7SKP299-201ENST00000606679 301 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC055764.2-201ENST00000610089 670 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.72□□□□□ -1.81
LITAFQ99732 MIR7973-1-201ENST00000614683 76 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AL158063.1-201ENST00000615349 536 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 AP003072.4-201ENST00000624580 310 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 CLUHP10-201ENST00000631979 980 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 AC006453.3-201ENST00000635891 377 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LITAFQ99732 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
LITAFQ99732 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LITAFQ99732 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LITAFQ99732 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.72□□□□□ -1.81
LITAFQ99732 AC011447.7-201ENST00000624228 1590 ntBASIC3.72□□□□□ -1.81
LITAFQ99732 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.71□□□□□ -1.81
LITAFQ99732 ZNF652P1-201ENST00000442420 1309 ntBASIC3.71□□□□□ -1.81
LITAFQ99732 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
LITAFQ99732 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LITAFQ99732 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
LITAFQ99732 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
LITAFQ99732 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 RBPJP7-201ENST00000442803 1447 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 RBPJP5-201ENST00000449433 1447 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LITAFQ99732 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LITAFQ99732 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
LITAFQ99732 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LITAFQ99732 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 Y_RNA.408-201ENST00000383987 102 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 RNU6-192P-201ENST00000391253 100 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 MIR1271-201ENST00000408537 86 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 Y_RNA.599-201ENST00000410489 109 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 OR51A3P-201ENST00000413596 924 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 AL360013.1-201ENST00000419031 858 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 AL672212.1-201ENST00000422246 400 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 MGAT2P2-201ENST00000427194 797 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 IFNNP1-201ENST00000429219 553 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 PHBP4-201ENST00000437447 837 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 UBE2V1P5-201ENST00000440070 405 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 AL445466.1-201ENST00000448432 357 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AC104306.1-201ENST00000449702 371 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 PNPLA4P1-201ENST00000458328 305 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 RNA5SP103-201ENST00000459503 118 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.71□□□□□ -1.82
LITAFQ99732 RN7SL39P-201ENST00000462264 297 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 RN7SL269P-201ENST00000467795 305 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LITAFQ99732 RPS6P4-201ENST00000494693 758 ntBASIC3.71□□□□□ -1.82
LITAFQ99732 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC3.71□□□□□ -1.82
LITAFQ99732 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms