Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL21A1Q96P44 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.37□□□□□ -1.71
COL21A1Q96P44 A2MP1-204ENST00000566278 4130 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL21A1Q96P44 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL21A1Q96P44 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL21A1Q96P44 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL21A1Q96P44 AL355852.1-201ENST00000454081 1771 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL21A1Q96P44 OR56B2P-201ENST00000317102 954 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 RNU6-697P-201ENST00000363348 107 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL21A1Q96P44 RSU1P3-201ENST00000412878 835 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 AL591848.1-201ENST00000413092 322 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 OR2X1P-201ENST00000421144 687 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 Z74021.1-201ENST00000423610 407 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 H2AFZP6-201ENST00000444403 394 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC079168.2-201ENST00000453977 416 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL21A1Q96P44 ATP5G1P3-201ENST00000463301 410 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC011005.3-201ENST00000491624 395 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC108022.1-201ENST00000493466 478 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC113430.1-201ENST00000506872 718 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL21A1Q96P44 OR7H2P-201ENST00000513483 306 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 IGKV1-32-201ENST00000519290 311 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC008147.3-201ENST00000548666 354 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC122134.1-201ENST00000565664 1104 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC067838.1-201ENST00000606064 577 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC100827.5-201ENST00000615883 426 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 MIR6853-201ENST00000619642 74 ntBASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL21A1Q96P44 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL21A1Q96P44 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.36□□□□□ -1.71
COL21A1Q96P44 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 AL031119.1-201ENST00000404707 1879 ntBASIC4.35□□□□□ -1.71
COL21A1Q96P44 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL21A1Q96P44 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL21A1Q96P44 MIR298-201ENST00000401212 88 ntBASIC4.35□□□□□ -1.71
COL21A1Q96P44 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 RN7SKP267-201ENST00000410381 285 ntBASIC4.35□□□□□ -1.71
COL21A1Q96P44 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL21A1Q96P44 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 MTCO1P51-201ENST00000427672 1060 ntBASIC4.35□□□□□ -1.71
COL21A1Q96P44 USP9YP9-201ENST00000429406 715 ntBASIC4.35□□□□□ -1.71
COL21A1Q96P44 AL049745.1-201ENST00000433953 286 ntBASIC4.35□□□□□ -1.71
COL21A1Q96P44 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 RPL21P133-201ENST00000443666 476 ntBASIC4.35□□□□□ -1.71
COL21A1Q96P44 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 H2AFZP5-201ENST00000446960 382 ntBASIC4.35□□□□□ -1.71
COL21A1Q96P44 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 AC090142.1-201ENST00000465776 462 ntBASIC4.35□□□□□ -1.71
COL21A1Q96P44 AC025164.1-201ENST00000496249 478 ntBASIC4.35□□□□□ -1.71
COL21A1Q96P44 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL21A1Q96P44 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 AC009237.17-201ENST00000618111 748 ntBASIC4.35□□□□□ -1.71
COL21A1Q96P44 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.35□□□□□ -1.71
COL21A1Q96P44 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL21A1Q96P44 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL21A1Q96P44 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL21A1Q96P44 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL21A1Q96P44 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL21A1Q96P44 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL21A1Q96P44 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL21A1Q96P44 RPL37P18-201ENST00000411602 243 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 RBMY2KP-201ENST00000418221 992 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 CYCSP11-201ENST00000436426 315 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms