Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SRRM1P3-201ENST00000426911 2678 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 RNU6-553P-201ENST00000364047 96 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 RNU4-75P-201ENST00000364621 146 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 RNU6-549P-201ENST00000384433 107 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 HMGN1P36-201ENST00000446623 298 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 CR383656.1-201ENST00000484916 377 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 SETP21-201ENST00000514799 892 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 ELOCP32-201ENST00000548625 324 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC010198.2-201ENST00000550612 259 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 DUXAP1-201ENST00000556632 463 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 RBM22P12-201ENST00000567098 1255 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 RN7SL290P-201ENST00000578661 300 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC090236.2-201ENST00000587933 1101 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC021749.1-201ENST00000604322 607 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC010738.1-201ENST00000604970 987 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC104073.3-201ENST00000610942 955 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC122133.1-201ENST00000613964 233 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC006338.2-201ENST00000616864 791 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AP004607.9-201ENST00000618202 316 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC010435.1-201ENST00000623353 1177 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC112255.1-201ENST00000624070 2493 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC004817.4-201ENST00000602396 3625 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AC002525.1-201ENST00000624392 1622 ntBASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CHAMP1Q96JM3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 MIR23A-201ENST00000385245 73 ntBASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 AL034403.1-201ENST00000399414 885 ntBASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 AC127526.2-201ENST00000426436 775 ntBASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 YWHAZP7-201ENST00000436906 631 ntBASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 AC097499.1-201ENST00000444277 208 ntBASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 AC090804.1-201ENST00000448870 490 ntBASIC6.38□□□□□ -1.39
CHAMP1Q96JM3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms