Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC084033.1-201ENST00000550830 633 ntBASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 OR1F2P-201ENST00000570470 933 ntBASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 AP001542.1-201ENST00000591314 200 ntBASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 AC131238.1-201ENST00000617135 328 ntBASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 AC091905.2-201ENST00000623143 306 ntBASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 SDAD1P1-202ENST00000524156 2051 ntBASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.83□□□□□ -1.8
RTN4IP1Q8WWV3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AC093775.1-201ENST00000624154 1868 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 OR52B1P-201ENST00000316506 909 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 RNU1-44P-201ENST00000384453 163 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 RNU6-1263P-201ENST00000384601 106 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 FCF1P5-201ENST00000406490 482 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 RSU1P3-201ENST00000412878 835 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 BX510359.2-201ENST00000417920 305 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 PA2G4P6-201ENST00000438325 1197 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AC011753.3-201ENST00000443436 406 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 RPS3AP53-201ENST00000454716 778 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AC016687.1-201ENST00000482574 353 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 RPL32P9-201ENST00000487963 407 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AC008897.1-201ENST00000494006 347 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AF186190.1-201ENST00000517470 480 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 SOX5P1-201ENST00000524155 1127 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 BRD9P1-201ENST00000529855 560 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AL391358.1-201ENST00000605342 190 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 LINC00901.1-201ENST00000617252 152 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AL445528.2-201ENST00000620582 470 ntBASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.82□□□□□ -1.8
RTN4IP1Q8WWV3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AC132825.1-201ENST00000463573 2247 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 RN7SKP267-201ENST00000410381 285 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 RN7SKP100-201ENST00000411258 284 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 GSTM3P2-201ENST00000412746 530 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 UBTFL3-201ENST00000418934 1024 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 RPS26P13-201ENST00000419030 330 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AC004074.1-201ENST00000421810 1063 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AC104837.2-201ENST00000427236 424 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 SKP1P3-201ENST00000429280 487 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AC016831.4-201ENST00000438302 307 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 RPL12P3-201ENST00000440080 396 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 H2AFZP5-201ENST00000446960 382 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 MTND4LP12-201ENST00000448237 295 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AC006967.1-201ENST00000467608 589 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 UBTFL6-201ENST00000477929 1024 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AC093270.2-201ENST00000486157 792 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 NDUFA5P12-201ENST00000503796 343 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 RN7SKP276-201ENST00000516242 268 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 IGLV3-26-201ENST00000520756 302 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AC125612.1-201ENST00000547580 377 ntBASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.81□□□□□ -1.8
RTN4IP1Q8WWV3 AC122134.1-201ENST00000565664 1104 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms