Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC027228.2-201ENST00000567141 2154 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 RPS29P7-201ENST00000439662 171 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 RPS3AP12-201ENST00000443616 753 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC112484.5-201ENST00000624189 228 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC092162.3-201ENST00000624511 1624 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AL137141.1-201ENST00000624622 4836 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AL445487.1-201ENST00000415694 1580 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 NPM1P38-201ENST00000403835 865 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 RPL21P65-201ENST00000406094 466 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 COX5BP7-201ENST00000414780 274 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AL591623.2-201ENST00000449978 222 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AL935212.3-201ENST00000450729 284 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 RPL7P15-201ENST00000461190 712 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 SNORA51-201ENST00000606420 132 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC012314.7-201ENST00000619693 93 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 AC006453.5-201ENST00000636451 619 ntBASIC3.01□□□□□ -1.93
ALMS1Q8TCU4 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 AL031119.1-201ENST00000404707 1879 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 AC020890.1-201ENST00000491837 504 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 AC016559.2-201ENST00000510759 359 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 AL117339.4-201ENST00000608335 7063 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 AC011933.1-201ENST00000413334 321 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 TCEA1P4-201ENST00000415066 844 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 AL451139.1-201ENST00000434718 346 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 CYCSP43-201ENST00000438233 310 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 AC116533.1-201ENST00000459748 321 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 AC021660.1-201ENST00000465006 554 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 AC018690.1-201ENST00000608144 626 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 AC100778.3-201ENST00000580060 1750 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 DHX9P1-201ENST00000436565 3076 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ALMS1Q8TCU4 MIR491-201ENST00000384877 84 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 AC017078.1-201ENST00000416146 368 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 RNA5SP49-201ENST00000516450 115 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3□□□□□ -1.93
ALMS1Q8TCU4 GTF2IP22-201ENST00000554443 182 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 AC040958.1-201ENST00000561102 201 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 AC112230.1-201ENST00000604342 547 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 uc_338.13-201ENST00000618243 179 ntBASIC3□□□□□ -1.93
ALMS1Q8TCU4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms