Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.2□□□□□ -1.58
CPEB3Q8NE35 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CPEB3Q8NE35 AC012254.3-201ENST00000591183 2117 ntBASIC5.2□□□□□ -1.58
CPEB3Q8NE35 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CPEB3Q8NE35 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CPEB3Q8NE35 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CPEB3Q8NE35 AC005539.1-201ENST00000443768 1479 ntBASIC5.2□□□□□ -1.58
CPEB3Q8NE35 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CPEB3Q8NE35 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 Y_RNA.41-201ENST00000362646 102 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 TAF9BP1-201ENST00000396646 746 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AL096800.1-201ENST00000405326 893 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 RPL7P8-201ENST00000411964 730 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 CEACAMP8-201ENST00000413902 580 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 CDK8P2-201ENST00000415020 547 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 TCEA1P4-201ENST00000415066 844 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AK4P4-201ENST00000419465 646 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 HMGB1P45-201ENST00000435986 653 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC110602.1-201ENST00000437414 318 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 RPS7P3-201ENST00000443360 580 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 RPS26P30-201ENST00000443431 335 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 RPL5P10-201ENST00000445207 894 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 CDC27P1-201ENST00000445384 715 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC239798.3-201ENST00000454459 408 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 RANP1-206ENST00000455094 651 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 Z83838.1-202ENST00000456225 839 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 RN7SL72P-201ENST00000460697 269 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC098583.1-201ENST00000480875 255 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC113430.1-201ENST00000506872 718 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 CDC42P4-201ENST00000510507 563 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 RN7SKP288-201ENST00000516227 268 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 RNU6-1004P-201ENST00000516584 111 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 IGHV3-63-201ENST00000518422 341 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AL139174.1-201ENST00000531489 886 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC068305.2-201ENST00000550567 1205 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC004825.1-201ENST00000555068 586 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC007956.1-201ENST00000555623 542 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC012414.6-201ENST00000568241 401 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC006363.1-201ENST00000603806 463 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC131235.4-201ENST00000609288 620 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 MIR6809-201ENST00000612189 116 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AL021918.2-201ENST00000613415 194 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC010678.1-201ENST00000614118 713 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC024595.1-201ENST00000623088 387 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC026523.2-201ENST00000625039 7739 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 AC012020.1-201ENST00000624541 1728 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.19□□□□□ -1.58
CPEB3Q8NE35 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CPEB3Q8NE35 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms