Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 PISRT1-201ENST00000626175 531 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 SNORA16A-202ENST00000628458 135 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 AL133216.2-202ENST00000634512 349 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 MIR1910-201ENST00000636955 80 ntBASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NPAS3Q8IXF0 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 RNF6P1-201ENST00000444889 1784 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AC005614.1-201ENST00000598952 3653 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 MAPK10-357ENST00000641831 2858 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 Y_RNA.135-201ENST00000363439 95 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 U8.14-201ENST00000390843 143 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AC068050.1-201ENST00000394891 380 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 EI24P3-201ENST00000399046 1062 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 PRELID1P1-201ENST00000403549 660 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 MTCO1P54-201ENST00000430139 712 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 RAB9AP5-201ENST00000437794 597 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 RAB9AP2-201ENST00000443911 597 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AC132479.1-201ENST00000449160 144 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 RPL7P52-201ENST00000449200 742 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AC144530.1-201ENST00000452862 555 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 MTND1P12-201ENST00000455231 147 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 RNU6-329P-201ENST00000459618 107 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AC063943.1-201ENST00000465434 453 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 RN7SL187P-201ENST00000495587 303 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 SNX5P1-201ENST00000505757 1041 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AC093870.1-201ENST00000506837 213 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 HMGN1P16-201ENST00000508308 283 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 Y_RNA.672-201ENST00000516289 104 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 RNU6-835P-201ENST00000516974 104 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AC010525.2-201ENST00000590920 195 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AL359704.2-201ENST00000604335 521 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AL355480.1-201ENST00000629041 99 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 AC010325.3-201ENST00000641084 394 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS3Q8IXF0 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 OR10R3P-201ENST00000361688 942 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 U8.3-201ENST00000363321 132 ntBASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS3Q8IXF0 SNORA69-201ENST00000383895 132 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms