Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC009269.6-201ENST00000621778 588 ntBASIC5.57□□□□□ -1.52
HERC6Q8IVU3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HERC6Q8IVU3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 METTL21EP-201ENST00000298105 713 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 SNORA70.6-201ENST00000383934 134 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 RNU6-468P-201ENST00000384003 109 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 RNU6-481P-201ENST00000384194 107 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AL024507.1-201ENST00000412741 274 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC069213.2-201ENST00000420238 366 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 MTND2P9-201ENST00000422293 931 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC007559.1-201ENST00000428736 355 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AL137845.2-201ENST00000444292 988 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 RPL36AP15-201ENST00000444514 266 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 RN7SL319P-201ENST00000480656 221 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 GAPDHP56-201ENST00000506031 988 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC010374.2-201ENST00000512933 535 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC022884.3-201ENST00000579571 248 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 MIR548Y-201ENST00000582739 110 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC008814.1-201ENST00000603797 406 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC022960.3-201ENST00000619794 441 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AC011815.3-201ENST00000624194 473 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 MAPK10-328ENST00000641553 4009 ntBASIC5.56□□□□□ -1.52
HERC6Q8IVU3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
HERC6Q8IVU3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 HSPA8P17-201ENST00000427029 1382 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 RNA5SP332-201ENST00000391063 115 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 UBE2V1P9-201ENST00000414760 368 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 OR5M12P-201ENST00000423388 929 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 SEC63P1-201ENST00000425785 1258 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 DEFB130D-201ENST00000426866 237 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 RPL7P11-201ENST00000437586 658 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC234781.3-201ENST00000452540 973 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 snoU13.1-201ENST00000459157 104 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC104687.1-201ENST00000485829 412 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC091912.1-201ENST00000511351 248 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC104115.2-201ENST00000523026 687 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AC138701.1-201ENST00000524329 714 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.55□□□□□ -1.52
HERC6Q8IVU3 NMNAT1P1-201ENST00000554095 876 ntBASIC5.55□□□□□ -1.52
HERC6Q8IVU3 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms