Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 INTS6P1-201ENST00000504674 2530 ntBASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 RPL23AP48-201ENST00000406913 488 ntBASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 OR51A6P-201ENST00000418680 1004 ntBASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 RPL7AP6-201ENST00000477943 801 ntBASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AC098799.3-201ENST00000506095 438 ntBASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AC138473.1-201ENST00000605717 526 ntBASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AC008966.2-201ENST00000606157 453 ntBASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 SDR42E1P1-201ENST00000611327 477 ntBASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 MIR4727-201ENST00000622232 55 ntBASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 AC018529.3-201ENST00000624212 2254 ntBASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC50Q8IVM0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 ZFRP1-201ENST00000457579 2970 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 Y_RNA.62-201ENST00000362840 99 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 RN7SKP224-201ENST00000364140 325 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 MIR708-201ENST00000390708 88 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 SNORA68.2-201ENST00000391263 128 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 RPL21P43-201ENST00000425440 472 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 H2AFZP5-201ENST00000446960 382 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 NPM1P39-201ENST00000449818 867 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AL356390.1-201ENST00000455684 397 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AC021006.3-201ENST00000530771 192 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AP001880.2-201ENST00000538233 448 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AC027455.1-201ENST00000574104 594 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 RN7SL753P-201ENST00000581238 290 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AC209154.1-201ENST00000582156 337 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AC009303.3-201ENST00000591103 736 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AC008536.1-201ENST00000602872 669 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AC112255.1-201ENST00000624070 2493 ntBASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC50Q8IVM0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AL391684.1-202ENST00000641293 1636 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 CIR1P2-201ENST00000514821 1342 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 SNORD74.4-201ENST00000364129 80 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 RPL23AP27-201ENST00000415161 451 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 NANOGP6-201ENST00000429190 847 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 UBE2V2P1-201ENST00000434717 398 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AL451050.1-201ENST00000450126 415 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 SCARNA10-201ENST00000459255 330 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC008033.2-201ENST00000542626 177 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC091178.1-203ENST00000584586 279 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC068790.5-201ENST00000602741 355 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC016769.4-201ENST00000616893 535 ntBASIC4.84□□□□□ -1.63
CCDC50Q8IVM0 AC131238.1-201ENST00000617135 328 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms