Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.79□□□□□ -1.64
NUP54Q7Z3B4 MAPK10-328ENST00000641553 4009 ntBASIC4.79□□□□□ -1.64
NUP54Q7Z3B4 AL592182.3-201ENST00000642132 3304 ntBASIC4.79□□□□□ -1.64
NUP54Q7Z3B4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUP54Q7Z3B4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUP54Q7Z3B4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NUP54Q7Z3B4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUP54Q7Z3B4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NUP54Q7Z3B4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC063976.2-201ENST00000425667 3556 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 PANDAR-201ENST00000629595 1506 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC104623.2-202ENST00000623477 4002 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 HMGB1P10-201ENST00000395823 563 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 RN7SKP126-201ENST00000411143 300 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC007738.1-201ENST00000413892 348 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 Z68694.1-201ENST00000413929 841 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 UBE2D3P3-201ENST00000426992 425 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AL627308.1-201ENST00000435693 821 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 YWHAZP2-201ENST00000440317 728 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 CYCSP24-201ENST00000445119 316 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AURKAPS1-201ENST00000451805 1212 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 RPS18P6-201ENST00000476880 458 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC104687.1-201ENST00000485829 412 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 MTCO2P9-201ENST00000503214 694 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 OR4A46P-201ENST00000527255 933 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC022884.2-201ENST00000578535 580 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC127024.5-201ENST00000580085 462 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AF230666.2-201ENST00000602328 725 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 ABI1P1-201ENST00000603375 1120 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC018695.5-201ENST00000605872 315 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 SAMMSON-227ENST00000642114 1199 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 GTF2H2B-203ENST00000508065 1432 ntBASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.78□□□□□ -1.64
NUP54Q7Z3B4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
NUP54Q7Z3B4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 AC007618.1-201ENST00000366455 732 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 HSPD1P16-201ENST00000402302 394 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 ATP5F1P6-201ENST00000402768 767 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 RPL21P67-201ENST00000402896 478 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 U3.36-201ENST00000408418 213 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 RNU2-17P-201ENST00000410290 190 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 EI24P4-201ENST00000423683 1078 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 HMGN2P27-201ENST00000427352 270 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms