Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTCHD4Q6ZW05 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTCHD4Q6ZW05 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTCHD4Q6ZW05 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
PTCHD4Q6ZW05 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PTCHD4Q6ZW05 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
PTCHD4Q6ZW05 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.09□□□□□ -1.6
PTCHD4Q6ZW05 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PTCHD4Q6ZW05 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PTCHD4Q6ZW05 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PTCHD4Q6ZW05 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 MAPK10-338ENST00000641647 3362 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AL159987.1-201ENST00000347911 293 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 MIR525-201ENST00000384978 85 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC092745.2-202ENST00000411880 369 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 TRGV6-201ENST00000417928 299 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 RPL7P53-201ENST00000421245 739 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 OR5AW1P-201ENST00000426334 1006 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 CDY14P-201ENST00000431260 1014 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC090018.1-201ENST00000434369 367 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AMYP1-201ENST00000440059 1023 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 CDY12P-201ENST00000440679 1015 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 CDY13P-201ENST00000445813 1015 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 RPL31P44-201ENST00000447680 377 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 CDY23P-201ENST00000451661 1014 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 OR52E3P-201ENST00000452083 936 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AZGP1P2-201ENST00000454506 345 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 UBFD1P1-201ENST00000473259 814 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 RN7SL570P-201ENST00000484405 292 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 RPL32P33-201ENST00000487023 394 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AL117692.1-201ENST00000494283 713 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC111193.1-201ENST00000504097 155 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 NDUFB4P12-201ENST00000513465 390 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 RNA5SP438-201ENST00000516561 112 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 RN7SKP183-201ENST00000517169 324 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 C1GALT1P3-201ENST00000522049 819 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 HMGN2P36-201ENST00000529541 409 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 HMGB1P42-201ENST00000532126 553 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC010198.2-201ENST00000550612 259 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC044913.1-201ENST00000557200 430 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 BNIP3P4-201ENST00000604946 565 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC090525.3-201ENST00000605601 189 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC068620.4-201ENST00000636730 1182 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 AC007671.2-201ENST00000637344 619 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 PWAR1-201ENST00000624188 2414 ntBASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD4Q6ZW05 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTCHD4Q6ZW05 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms