Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 AL133457.1-201ENST00000564251 987 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC060780.3-201ENST00000589464 80 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 VN1R79P-201ENST00000593540 513 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC124312.5-201ENST00000604451 268 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 AL020991.1-201ENST00000612314 373 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF43Q68DV7 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF43Q68DV7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RNF43Q68DV7 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 SAGE3P-201ENST00000619800 1635 ntBASIC6.61□□□□□ -1.35
RNF43Q68DV7 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.61□□□□□ -1.35
RNF43Q68DV7 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF43Q68DV7 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RNF43Q68DV7 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF43Q68DV7 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF43Q68DV7 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF43Q68DV7 AL136984.1-201ENST00000607611 1893 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF43Q68DV7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 RNA5SP510-201ENST00000364697 99 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 RN7SKP81-201ENST00000365603 331 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 AL157702.1-201ENST00000398764 426 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 RPL23AP39-201ENST00000415533 405 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RNF43Q68DV7 RNGTTP1-201ENST00000420965 728 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 RPS3P2-201ENST00000421346 701 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 ELOCP14-201ENST00000428070 331 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 AL512286.1-201ENST00000439244 400 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 ELOCP7-201ENST00000439968 331 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 OR52I1-201ENST00000450052 1050 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 PNPLA4P1-201ENST00000458328 305 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 AC068228.1-201ENST00000461723 211 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 SLC25A51P1-201ENST00000468432 871 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 AC114967.1-201ENST00000504890 259 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 AC021678.1-201ENST00000505195 936 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 KHDC1P1-201ENST00000511053 508 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 AC091133.4-201ENST00000511142 308 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 IGHV3-32-201ENST00000519182 355 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 TPRX1P1-201ENST00000557620 319 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 AC007494.1-201ENST00000562293 760 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 MIR4701-201ENST00000583094 63 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 AC010928.3-201ENST00000587712 541 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 AL365204.3-201ENST00000612448 685 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 MIR6811-201ENST00000620409 58 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 AP003122.6-201ENST00000623831 495 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 AC137056.2-201ENST00000624055 1958 ntBASIC6.6□□□□□ -1.35
RNF43Q68DV7 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.6□□□□□ -1.35
RNF43Q68DV7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF43Q68DV7 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
RNF43Q68DV7 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 CASC19-206ENST00000641028 1430 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 NEPNP-201ENST00000404786 1371 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AL033543.1-201ENST00000623440 13454 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 COX6B1P3-201ENST00000312310 260 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 RNU6-660P-201ENST00000364566 109 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 RN7SKP108-201ENST00000411367 328 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms