Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 HSD3BP3-201ENST00000514706 994 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AP003396.4-201ENST00000527574 265 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC091078.2-201ENST00000557145 559 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AL390726.5-202ENST00000564800 256 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC009712.1-201ENST00000564938 316 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AL354943.1-201ENST00000572103 781 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 MIR3154-201ENST00000577829 84 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 RN7SL290P-201ENST00000578661 300 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 MIR4502-201ENST00000580432 81 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC021171.1-201ENST00000603137 706 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AP003392.5-201ENST00000607857 415 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AP001437.1-201ENST00000608783 456 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AP001005.3-201ENST00000622049 129 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 SMG1P4-204ENST00000523028 4131 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 Z99496.1-201ENST00000469424 1477 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC011447.7-201ENST00000624228 1590 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 AL672167.1-204ENST00000641875 3017 ntBASIC5.37□□□□□ -1.55
RNF220Q5VTB9 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF220Q5VTB9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AL078621.3-201ENST00000623707 2042 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AL445437.1-201ENST00000623157 3087 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 RNA5SP232-201ENST00000364144 119 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 RNA5SP487-201ENST00000410186 122 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 RNGTTP1-201ENST00000420965 728 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC093155.1-201ENST00000440164 826 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 LINC02210-201ENST00000444561 288 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC073909.1-201ENST00000447112 999 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 RPL7P59-201ENST00000447700 943 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC234781.3-201ENST00000452540 973 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC098847.1-201ENST00000473094 348 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AL049874.2-201ENST00000492636 288 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 RPL7L1P13-201ENST00000511702 739 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC087808.1-201ENST00000520501 361 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AF279873.1-201ENST00000523393 313 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC010198.2-201ENST00000550612 259 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 HSPE1P2-201ENST00000554777 306 ntBASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF220Q5VTB9 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms