Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
RIF1Q5UIP0 AL683813.2-201ENST00000605245 502 ntBASIC4.34□□□□□ -1.71
RIF1Q5UIP0 AC135352.1-201ENST00000506173 1418 ntBASIC4.34□□□□□ -1.71
RIF1Q5UIP0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RIF1Q5UIP0 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RIF1Q5UIP0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.34□□□□□ -1.71
RIF1Q5UIP0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RIF1Q5UIP0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RIF1Q5UIP0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RIF1Q5UIP0 RNA5SP72-201ENST00000364442 117 ntBASIC4.34□□□□□ -1.72
RIF1Q5UIP0 PPIAP13-201ENST00000434706 478 ntBASIC4.34□□□□□ -1.72
RIF1Q5UIP0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 ICE2P1-201ENST00000512800 1849 ntBASIC4.34□□□□□ -1.72
RIF1Q5UIP0 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RIF1Q5UIP0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 RN7SKP156-201ENST00000410308 342 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 AL359265.1-201ENST00000440296 795 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 Y_RNA.719-201ENST00000517156 106 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 AC116553.2-201ENST00000564203 463 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 BPIFA4P-203ENST00000603168 689 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 AC016588.2-201ENST00000632484 3021 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 MFSD13B-201ENST00000420133 1290 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 RPL23AP52-201ENST00000439311 478 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 ISCUP1-201ENST00000454451 448 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 AL592156.1-201ENST00000508758 304 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 GTF2IP8-201ENST00000560687 584 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 CYCSP1-201ENST00000604815 315 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 AC140113.4-201ENST00000622087 222 ntBASIC4.33□□□□□ -1.72
RIF1Q5UIP0 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RIF1Q5UIP0 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AC004817.4-201ENST00000602396 3625 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 SMG1P6-201ENST00000532337 2930 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 TBCAP1-201ENST00000436520 327 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AC010460.1-201ENST00000507087 466 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AL021997.2-201ENST00000615674 271 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AC069542.2-201ENST00000624816 216 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 MIR183-201ENST00000384958 110 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 E2F6P2-201ENST00000420708 748 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 RNA5SP246-201ENST00000458909 119 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AC096754.1-201ENST00000508904 818 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AL049830.4-201ENST00000555149 351 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 uc_338.13-201ENST00000618243 179 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 AC012314.7-201ENST00000619693 93 ntBASIC4.32□□□□□ -1.72
RIF1Q5UIP0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms