Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC027449.1-201ENST00000608890 407 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC109583.2-201ENST00000617367 129 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC022106.2-201ENST00000620114 757 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC091046.2-201ENST00000620775 665 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC116563.2-201ENST00000624751 535 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 ATE1-AS1-202ENST00000636460 506 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 MTCO1P6-201ENST00000481192 1384 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC38Q502W7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC38Q502W7 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC106754.1-201ENST00000562632 1513 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC38Q502W7 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC005332.5-201ENST00000591222 2919 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC38Q502W7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC38Q502W7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC38Q502W7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC38Q502W7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 CASC19-221ENST00000641309 1382 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 OR9G4-201ENST00000302957 984 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 RNU6-549P-201ENST00000384433 107 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 NCSTNP1-201ENST00000406229 144 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 SFR1P2-201ENST00000421841 730 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 TNPO1P1-201ENST00000423641 1138 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 DYNLL1P7-201ENST00000429273 258 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC124944.2-201ENST00000429866 1242 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 RPS7P5-201ENST00000441482 581 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 HMGN1P36-201ENST00000446623 298 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AL591623.2-201ENST00000449978 222 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AL591363.1-201ENST00000450091 483 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 DNAJC19P8-201ENST00000452887 259 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 OR2AF1P-201ENST00000454899 889 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC022795.1-201ENST00000473808 480 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 RPL7P51-201ENST00000490532 749 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 RPL15P21-201ENST00000495592 567 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 UBE2V1P12-201ENST00000503954 474 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC119751.1-201ENST00000513357 765 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC138938.1-201ENST00000515431 782 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 RN7SKP99-201ENST00000517028 307 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC022360.1-201ENST00000521058 340 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 COX6B1P6-201ENST00000522347 255 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC124293.1-201ENST00000530034 493 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC006349.1-201ENST00000555526 235 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 MTND4LP24-201ENST00000572277 291 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 RN7SL356P-201ENST00000582228 248 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 MIR4505-201ENST00000582238 73 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC090312.2-201ENST00000582687 378 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AL137072.1-201ENST00000603444 466 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC073387.2-201ENST00000604797 784 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC005377.1-201ENST00000605126 456 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 RN7SL787P-201ENST00000613000 284 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC116447.1-201ENST00000613153 453 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC023509.5-201ENST00000617434 807 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 MIR6729-201ENST00000618194 65 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC132068.1-201ENST00000623805 459 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 CU639417.4-201ENST00000623928 207 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AP003400.3-201ENST00000624904 346 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC017104.5-201ENST00000637647 639 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC38Q502W7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC38Q502W7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC38Q502W7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC38Q502W7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC38Q502W7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC38Q502W7 AC104446.1-201ENST00000613728 1321 ntBASIC5.48□□□□□ -1.53
CCDC38Q502W7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CCDC38Q502W7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms