Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC234781.3-201ENST00000452540 973 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 RPL23AP56-201ENST00000460778 453 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC092691.2-201ENST00000461787 803 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC096741.1-201ENST00000472250 846 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 RN7SL481P-201ENST00000477764 299 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC005412.2-201ENST00000492004 341 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 RN7SKP276-201ENST00000516242 268 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 MTCYBP19-201ENST00000517463 1124 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 RAB9BP1-201ENST00000519581 626 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC109635.6-201ENST00000525487 1113 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 MTND5P21-201ENST00000531961 522 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 AP001880.2-201ENST00000538233 448 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC087888.1-201ENST00000550884 1254 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC023158.1-201ENST00000561632 1025 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC068020.1-201ENST00000594215 661 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC130352.1-201ENST00000602979 661 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 MIR7703-201ENST00000620784 77 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 MIR6810-201ENST00000622701 70 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 AP000943.4-201ENST00000622912 357 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 AC073869.10-201ENST00000642016 354 ntBASIC5.27□□□□□ -1.57
USP41Q3LFD5 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP41Q3LFD5 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USP41Q3LFD5 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP41Q3LFD5 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
USP41Q3LFD5 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
USP41Q3LFD5 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 AC069282.1-201ENST00000411911 526 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 MRPL50P1-201ENST00000431951 384 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 NRBF2P3-201ENST00000432731 865 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 AL157827.1-201ENST00000447622 132 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 AC245028.2-201ENST00000458673 253 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 RN7SL346P-201ENST00000491561 294 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 AC025918.2-201ENST00000558683 763 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 DPRXP4-201ENST00000578053 568 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 AC022884.2-201ENST00000578535 580 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 PRPF19P1-201ENST00000584766 898 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 AC006272.2-201ENST00000594725 163 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 AC084373.1-201ENST00000603311 235 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 AC008745.1-201ENST00000604064 271 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 AC018645.2-201ENST00000609151 472 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 AC022306.3-201ENST00000619930 550 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 AL022393.1-201ENST00000625142 1677 ntBASIC5.26□□□□□ -1.57
USP41Q3LFD5 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USP41Q3LFD5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
USP41Q3LFD5 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP41Q3LFD5 ZNF652P1-201ENST00000442420 1309 ntBASIC5.25□□□□□ -1.57
USP41Q3LFD5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP41Q3LFD5 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
USP41Q3LFD5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP41Q3LFD5 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP41Q3LFD5 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.25□□□□□ -1.57
USP41Q3LFD5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USP41Q3LFD5 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
USP41Q3LFD5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms