Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 CYCSP29-201ENST00000533731 318 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AC005191.1-201ENST00000603950 358 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AC006338.2-201ENST00000616864 791 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 AP000648.2-201ENST00000624182 404 ntBASIC5.4□□□□□ -1.54
SHROOM1Q2M3G4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
SHROOM1Q2M3G4 AL391684.1-202ENST00000641293 1636 ntBASIC5.4□□□□□ -1.55
SHROOM1Q2M3G4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.4□□□□□ -1.55
SHROOM1Q2M3G4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SHROOM1Q2M3G4 AL450326.2-201ENST00000421913 1962 ntBASIC5.4□□□□□ -1.55
SHROOM1Q2M3G4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHROOM1Q2M3G4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHROOM1Q2M3G4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SHROOM1Q2M3G4 AC135352.1-201ENST00000506173 1418 ntBASIC5.4□□□□□ -1.55
SHROOM1Q2M3G4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SHROOM1Q2M3G4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AL445437.1-201ENST00000623157 3087 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 Y_RNA.126-201ENST00000363382 111 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 OR1F12-201ENST00000402365 945 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 OR13Z1P-201ENST00000416141 834 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AL139095.3-201ENST00000419672 1203 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 GTF2IP2-201ENST00000424290 697 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 MTND4LP13-201ENST00000425022 298 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AC093840.1-201ENST00000511599 336 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AC026402.1-201ENST00000513642 170 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AC006349.1-201ENST00000555526 235 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AC027216.1-201ENST00000577726 685 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AC103792.1-201ENST00000603591 919 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AC114781.5-201ENST00000615297 108 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AL035461.2-201ENST00000619201 524 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AP000843.1-201ENST00000624880 701 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 AC010329.2-201ENST00000595195 2737 ntBASIC5.39□□□□□ -1.55
SHROOM1Q2M3G4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AC108467.2-201ENST00000617640 1597 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 RPL5P19-201ENST00000404228 893 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 SNRPFP1-201ENST00000414761 252 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AP000942.1-201ENST00000463969 747 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AC091917.2-201ENST00000505002 744 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 SNORD116-30-201ENST00000516468 85 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 SETP1-201ENST00000556014 845 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AC096553.1-201ENST00000605169 829 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 ARF4P1-201ENST00000605447 541 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AC090948.1-201ENST00000607464 549 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 AL121950.1-201ENST00000624993 2077 ntBASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.38□□□□□ -1.55
SHROOM1Q2M3G4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SHROOM1Q2M3G4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms