Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SRSF4Q08170 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SRSF4Q08170 Y_RNA.6-201ENST00000362350 114 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SRSF4Q08170 HMGB1P10-201ENST00000395823 563 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 EI24P3-201ENST00000399046 1062 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 DEFB108C-201ENST00000400154 252 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 RN7SKP121-201ENST00000410842 305 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 USP9YP33-201ENST00000412220 421 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AL513325.1-201ENST00000417716 1034 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC023128.2-201ENST00000420880 1223 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC012519.1-201ENST00000424588 610 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 BRWD1P3-201ENST00000428816 390 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 Z74696.2-201ENST00000436514 498 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 PPIAP10-201ENST00000438675 458 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 HMGN1P36-201ENST00000446623 298 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 HIGD1AP16-201ENST00000450986 258 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AL109741.2-201ENST00000455561 343 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC090589.1-201ENST00000473109 362 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC104763.1-201ENST00000475274 360 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC069304.1-201ENST00000491593 704 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC008565.1-201ENST00000509046 885 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC079140.3-201ENST00000511111 550 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SRSF4Q08170 RNA5SP434-201ENST00000516647 121 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 RNU6-1178P-201ENST00000516674 107 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 Y_RNA.695-201ENST00000516715 107 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 HIGD1AP10-201ENST00000527837 282 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AL121766.1-201ENST00000547436 487 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC010198.2-201ENST00000550612 259 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 NMNAT1P5-201ENST00000559657 841 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.9□□□□□ -1.63
SRSF4Q08170 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AL121834.1-201ENST00000572284 509 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.9□□□□□ -1.63
SRSF4Q08170 MIR3611-201ENST00000584484 83 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC107982.3-201ENST00000584957 985 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC091135.1-201ENST00000585943 307 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AL031281.1-201ENST00000604049 488 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AL353621.2-201ENST00000605340 133 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC010632.3-201ENST00000611377 369 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC004223.4-201ENST00000612426 332 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SRSF4Q08170 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AL359757.1-201ENST00000623176 255 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 AC022140.2-201ENST00000623500 188 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 OR1S1-201ENST00000624470 978 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AL049767.1-202ENST00000637826 242 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SRSF4Q08170 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.9□□□□□ -1.63
SRSF4Q08170 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SRSF4Q08170 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.9□□□□□ -1.63
SRSF4Q08170 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.9□□□□□ -1.63
SRSF4Q08170 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.9□□□□□ -1.63
SRSF4Q08170 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SRSF4Q08170 AC017007.4-201ENST00000503353 1352 ntBASIC4.9□□□□□ -1.63
SRSF4Q08170 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.9□□□□□ -1.63
SRSF4Q08170 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.9□□□□□ -1.63
SRSF4Q08170 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.9□□□□□ -1.63
SRSF4Q08170 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.9□□□□□ -1.63
SRSF4Q08170 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.89□□□□□ -1.63
SRSF4Q08170 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRSF4Q08170 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SRSF4Q08170 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SRSF4Q08170 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRSF4Q08170 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRSF4Q08170 NXF4-202ENST00000416098 1465 ntBASIC4.89□□□□□ -1.63
SRSF4Q08170 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRSF4Q08170 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SRSF4Q08170 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms